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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_046314.1 RefSeqGene
- Range
-
5147..23657
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_1329
mRNA and Protein(s)
-
NM_001385110.1 → NP_001372039.1 signal transducer and activator of transcription 2 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC025574
- UniProtKB/TrEMBL
- R9QDW3, R9QDW5, R9QDY3, R9QE44, R9QE53, R9QE71, R9QFA6, R9QGC0
- Conserved Domains (5) summary
-
- cd10373
Location:545 → 695
- SH2_STAT2; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 2 proteins
- smart00964
Location:2 → 120
- STAT_int; STAT protein, protein interaction domain
- cd16852
Location:137 → 308
- STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
- cl28920
Location:312 → 464
- STAT_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription (STAT)
- pfam12188
Location:775 → 827
- STAT2_C; Signal transducer and activator of transcription 2 C terminal
-
NM_001385111.1 → NP_001372040.1 signal transducer and activator of transcription 2 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC025574
- Consensus CDS
-
CCDS91707.1
- UniProtKB/TrEMBL
- A0A494C164, R9QE44, R9QFA6
- Related
- ENSP00000498876.1, ENST00000651915.1
- Conserved Domains (5) summary
-
- cd10373
Location:523 → 673
- SH2_STAT2; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 2 proteins
- smart00964
Location:2 → 124
- STAT_int; STAT protein, protein interaction domain
- cd16852
Location:141 → 312
- STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
- cl28920
Location:316 → 446
- STAT_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription (STAT)
- pfam12188
Location:753 → 805
- STAT2_C; Signal transducer and activator of transcription 2 C terminal
-
NM_001385113.1 → NP_001372042.1 signal transducer and activator of transcription 2 isoform 5
Status: REVIEWED
- Source sequence(s)
-
AC025574
- UniProtKB/TrEMBL
-
A0A8V8TLJ4
- Related
- ENSP00000513600.1, ENST00000698193.1
- Conserved Domains (5) summary
-
- cd10373
Location:556 → 706
- SH2_STAT2; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 2 proteins
- smart00964
Location:2 → 124
- STAT_int; STAT protein, protein interaction domain
- cd16852
Location:141 → 312
- STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
- cl28920
Location:316 → 475
- STAT_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription (STAT)
- pfam12188
Location:786 → 805
- STAT2_C; Signal transducer and activator of transcription 2 C terminal
-
NM_001385114.1 → NP_001372043.1 signal transducer and activator of transcription 2 isoform 6
Status: REVIEWED
- Source sequence(s)
-
AC025574
- UniProtKB/TrEMBL
- R9QDW3, R9QDW5, R9QDY3, R9QE44, R9QE53, R9QE71, R9QFA6, R9QGC0
- Related
-
ENST00000698187.1
- Conserved Domains (5) summary
-
- cd10373
Location:549 → 699
- SH2_STAT2; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 2 proteins
- smart00964
Location:2 → 124
- STAT_int; STAT protein, protein interaction domain
- cd16852
Location:141 → 312
- STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
- cl28920
Location:316 → 468
- STAT_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription (STAT)
- pfam12188
Location:779 → 831
- STAT2_C; Signal transducer and activator of transcription 2 C terminal
-
NM_001385115.1 → NP_001372044.1 signal transducer and activator of transcription 2 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AC025574
- UniProtKB/TrEMBL
- R9QDW3, R9QDW5, R9QDY3, R9QE44, R9QE53, R9QE71, R9QFA6, R9QGC0
- Conserved Domains (5) summary
-
- cd10373
Location:542 → 692
- SH2_STAT2; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 2 proteins
- smart00964
Location:2 → 120
- STAT_int; STAT protein, protein interaction domain
- cd16852
Location:137 → 308
- STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
- cl28920
Location:312 → 471
- STAT_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription (STAT)
- pfam12188
Location:772 → 824
- STAT2_C; Signal transducer and activator of transcription 2 C terminal
-
NM_005419.4 → NP_005410.1 signal transducer and activator of transcription 2 isoform 1
See identical proteins and their annotated locations for NP_005410.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
BC051284, DB482283
- Consensus CDS
-
CCDS8917.1
- UniProtKB/Swiss-Prot
- B4DLC7, G3V2M6, P52630, Q16430, Q16431, Q9UDL4
- UniProtKB/TrEMBL
- R9QDW3, R9QDW5, R9QDY3, R9QE44, R9QE53, R9QE65, R9QE71, R9QFA6, R9QGC0
- Related
- ENSP00000315768.4, ENST00000314128.9
- Conserved Domains (5) summary
-
- cd10373
Location:556 → 706
- SH2_STAT2; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 2 proteins
- smart00964
Location:2 → 124
- STAT_int; STAT protein, protein interaction domain
- cd16852
Location:141 → 312
- STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
- cl28920
Location:316 → 475
- STAT_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription (STAT)
- pfam12188
Location:786 → 838
- STAT2_C; Signal transducer and activator of transcription 2 C terminal
-
NM_198332.2 → NP_938146.1 signal transducer and activator of transcription 2 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site, compared to variant 1. The resulting isoform (2) lacks an internal 4-aa segment, compared to isoform 1.
- Source sequence(s)
-
AK296939, BC051284
- Consensus CDS
-
CCDS55836.1
- UniProtKB/TrEMBL
- R9QDW3, R9QDW5, R9QDY3, R9QE44, R9QE53, R9QE71, R9QFA6, R9QGC0
- Related
- ENSP00000450751.1, ENST00000557235.5
- Conserved Domains (5) summary
-
- cd10373
Location:552 → 702
- SH2_STAT2; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 2 proteins
- smart00964
Location:2 → 120
- STAT_int; STAT protein, protein interaction domain
- pfam01017
Location:138 → 310
- STAT_alpha; STAT protein, all-alpha domain
- pfam02864
Location:312 → 561
- STAT_bind; STAT protein, DNA binding domain
- pfam12188
Location:779 → 834
- STAT2_C; Signal transducer and activator of transcription 2 C terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
56341597..56360107 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011538698.4 → XP_011537000.1 signal transducer and activator of transcription 2 isoform X2
- UniProtKB/TrEMBL
- R9QDW3, R9QDW5, R9QDY3, R9QE44, R9QE53, R9QE71, R9QFA6, R9QGC0
- Conserved Domains (5) summary
-
- cd10373
Location:560 → 710
- SH2_STAT2; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 2 proteins
- smart00964
Location:2 → 120
- STAT_int; STAT protein, protein interaction domain
- pfam01017
Location:138 → 310
- STAT_alpha; STAT protein, all-alpha domain
- pfam02864
Location:312 → 569
- STAT_bind; STAT protein, DNA binding domain
- pfam12188
Location:787 → 842
- STAT2_C; Signal transducer and activator of transcription 2 C terminal
-
XM_011538697.3 → XP_011536999.1 signal transducer and activator of transcription 2 isoform X1
- UniProtKB/TrEMBL
- R9QDW3, R9QDW5, R9QDY3, R9QE44, R9QE53, R9QE71, R9QFA6, R9QGC0
- Conserved Domains (5) summary
-
- cd10373
Location:564 → 714
- SH2_STAT2; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 2 proteins
- smart00964
Location:2 → 124
- STAT_int; STAT protein, protein interaction domain
- cd16852
Location:141 → 312
- STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
- cl28920
Location:316 → 475
- STAT_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription (STAT)
- pfam12188
Location:794 → 846
- STAT2_C; Signal transducer and activator of transcription 2 C terminal
-
XM_047429469.1 → XP_047285425.1 signal transducer and activator of transcription 2 isoform X5
- UniProtKB/TrEMBL
-
Q6N0A7
- Related
-
ENST00000556539.5
-
XM_011538699.4 → XP_011537001.1 signal transducer and activator of transcription 2 isoform X3
- UniProtKB/TrEMBL
-
A0JLQ9
- Conserved Domains (4) summary
-
- smart00964
Location:2 → 124
- STAT_int; STAT protein, protein interaction domain
- pfam01017
Location:142 → 314
- STAT_alpha; STAT protein, all-alpha domain
- pfam02864
Location:316 → 573
- STAT_bind; STAT protein, DNA binding domain
- cl15255
Location:564 → 584
- SH2; Src homology 2 (SH2) domain
-
XM_047429468.1 → XP_047285424.1 signal transducer and activator of transcription 2 isoform X4
- UniProtKB/TrEMBL
-
A0JLQ9
-
XM_047429470.1 → XP_047285426.1 signal transducer and activator of transcription 2 isoform X6
- UniProtKB/TrEMBL
-
B4DLC8
-
XM_047429471.1 → XP_047285427.1 signal transducer and activator of transcription 2 isoform X7
- UniProtKB/TrEMBL
-
B4DLC8
- Related
- ENSP00000387354.2, ENST00000418572.7
-
XM_047429472.1 → XP_047285428.1 signal transducer and activator of transcription 2 isoform X7
- UniProtKB/TrEMBL
-
B4DLC8
RNA
-
XR_007063122.1 RNA Sequence
-
XR_245953.4 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
56309243..56327794 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054373086.1 → XP_054229061.1 signal transducer and activator of transcription 2 isoform X2
- UniProtKB/TrEMBL
- R9QDW3, R9QDW5, R9QDY3, R9QE44, R9QE53, R9QE71, R9QFA6, R9QGC0
-
XM_054373085.1 → XP_054229060.1 signal transducer and activator of transcription 2 isoform X1
- UniProtKB/TrEMBL
- R9QDW3, R9QDW5, R9QDY3, R9QE44, R9QE53, R9QE71, R9QFA6, R9QGC0
-
XM_054373089.1 → XP_054229064.1 signal transducer and activator of transcription 2 isoform X5
- UniProtKB/TrEMBL
-
Q6N0A7
-
XM_054373087.1 → XP_054229062.1 signal transducer and activator of transcription 2 isoform X3
- UniProtKB/TrEMBL
-
A0JLQ9
-
XM_054373088.1 → XP_054229063.1 signal transducer and activator of transcription 2 isoform X4
- UniProtKB/TrEMBL
-
A0JLQ9
-
XM_054373090.1 → XP_054229065.1 signal transducer and activator of transcription 2 isoform X6
- UniProtKB/TrEMBL
-
B4DLC8
-
XM_054373091.1 → XP_054229066.1 signal transducer and activator of transcription 2 isoform X7
- UniProtKB/TrEMBL
-
B4DLC8
-
XM_054373092.1 → XP_054229067.1 signal transducer and activator of transcription 2 isoform X7
- UniProtKB/TrEMBL
-
B4DLC8
RNA
-
XR_008488674.1 RNA Sequence
-
XR_008488673.1 RNA Sequence