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    Edem2 ER degradation enhancer, mannosidase alpha-like 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34714, updated on 9-Dec-2024

    Summary

    Official Symbol
    Edem2provided by FlyBase
    Official Full Name
    ER degradation enhancer, mannosidase alpha-like 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0032480
    Locus tag
    Dmel_CG5682
    See related
    AllianceGenome:FB:FBgn0032480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5682; dEDEM2; Dmel\CG5682; edem2; EDEM2
    Summary
    Enables unfolded protein binding activity. Involved in endoplasmic reticulum unfolded protein response and ubiquitin-dependent glycoprotein ERAD pathway. Located in endoplasmic reticulum. Is expressed in adult head and organism. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type II. Orthologous to human EDEM3 (ER degradation enhancing alpha-mannosidase like protein 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Edem2 in Genome Data Viewer
    Location:
    34A8-34A9; 2-47 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13192201..13197281)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13192201..13197281)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Alg7 dolichyl-phosphate N-acetylglucosaminephosphotransferase Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase Neighboring gene uncharacterized protein Neighboring gene Radial spoke head protein 1 Neighboring gene uncharacterized protein Neighboring gene Phosphoethanolamine cytidylyltransferase Neighboring gene small nuclear RNA U2 at 34AB a Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity ISM
    Inferred from Sequence Model
    more info
    PubMed 
    enables unfolded protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ER degradation enhancer, mannosidase alpha-like 2
    Names
    CG5682-PA
    CG5682-PB
    Edem2-PA
    Edem2-PB
    NP_001260434.1
    NP_609611.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13192201..13197281
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135767.2NP_609611.1  ER degradation enhancer, mannosidase alpha-like 2, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609611.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MS36, Q9VK27
      Related
      FBpp0080019
      Conserved Domains (2) summary
      cd02126
      Location:645770
      PA_EDEM3_like; PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins. This group contains various PA domain-containing proteins similar to mouse EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein). EDEM3 contains a region, similar ...
      pfam01532
      Location:57494
      Glyco_hydro_47; Glycosyl hydrolase family 47
    2. NM_001273505.1NP_001260434.1  ER degradation enhancer, mannosidase alpha-like 2, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260434.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PCV1, Q8MS36
      Conserved Domains (2) summary
      cd02126
      Location:636761
      PA_EDEM3_like; PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins. This group contains various PA domain-containing proteins similar to mouse EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein). EDEM3 contains a region, similar ...
      pfam01532
      Location:57494
      Glyco_hydro_47; Glycosyl hydrolase family 47