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    flip flippy [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40539, updated on 9-Dec-2024

    Summary

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    Official Symbol
    flipprovided by FlyBase
    Official Full Name
    flippyprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037229
    Locus tag
    Dmel_CG9766
    See related
    AllianceGenome:FB:FBgn0037229
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9766; Dmel\CG9766
    Summary
    Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See flip in Genome Data Viewer
    Location:
    82A1-82A1; 3-47.1 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4269221..4277928, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (94943..103650, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Odorant receptor 82a Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45597 Neighboring gene complexin Neighboring gene Neprilysin-like 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. [LTR retrotransposons as a source of promoters in the Drosophila genome]. Makunin IV, et al. Genetika, 2010 Sep. PMID 21061618
    2. Lmpt regulates the function of Drosophila muscle by acting as a repressor of Wnt signaling. Zhang J, et al. Gene, 2023 Aug 5. PMID 37245676
    3. Gene transposition as a cause of hybrid sterility in Drosophila. Masly JP, et al. Science, 2006 Sep 8. PMID 16960009
    4. Natural variation in the regulation of neurodevelopmental genes modifies flight performance in Drosophila. Spierer AN, et al. PLoS Genet, 2021 Mar. PMID 33735180, Free PMC Article
    5. Identification of circadian-clock-regulated enhancers and genes of Drosophila melanogaster by transposon mobilization and luciferase reporting of cyclical gene expression. Stempfl T, et al. Genetics, 2002 Feb. PMID 11861563, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    mobile_element

    • Loc: c4270788-4270658 mobile_element_type = transposon:INE-1{}3645
    • Loc: c4277202-4270790 mobile_element_type = transposon:Burdock{}1187

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of gene expression IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    flippy
    Names
    CG9766-PC
    flip-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      4269221..4277928 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001104202.2 → NP_001097672.1  flippy [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097672.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8JQS3
      Conserved Domains (4) summary
      smart00060
      Location:35 → 98
      FN3; Fibronectin type 3 domain
      cd00204
      Location:193 → 311
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:197 → 290
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:158 → 189
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8JQS3 A8JQS3
    Q7JVU0 Q7JVU0

    Gene LinkOut

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