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    Phyhd1 Phytanoyl-CoA dioxygenase domain containing 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41275, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Phyhd1provided by FlyBase
    Official Full Name
    Phytanoyl-CoA dioxygenase domain containing 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0037819
    Locus tag
    Dmel_CG14688
    See related
    AllianceGenome:FB:FBgn0037819
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG14688; Dmel\CG14688; PHYH; PHYHD1
    Summary
    Predicted to enable 2-oxoglutarate-dependent dioxygenase activity. Is expressed in adult glial cell; mesoderm anlage; and organism. Orthologous to human PHYHD1 (phytanoyl-CoA dioxygenase domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Phyhd1 in Genome Data Viewer
    Location:
    86C4-86C4; 3-50 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10677737..10680925, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (6503459..6506647, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene homothorax Neighboring gene antisense RNA:CR44018 Neighboring gene long non-coding RNA:CR44230 Neighboring gene uncharacterized protein Neighboring gene Skeletor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive tissue-specific expression variation and novel regulators underlying circadian behavior. Litovchenko M, et al. Sci Adv, 2021 Jan. PMID 33514540, Free PMC Article
    2. Accurate genome-wide predictions of spatio-temporal gene expression during embryonic development. Zhou J, et al. PLoS Genet, 2019 Sep. PMID 31553718, Free PMC Article
    3. Drosophila FIT is a protein-specific satiety hormone essential for feeding control. Sun J, et al. Nat Commun, 2017 Jan 19. PMID 28102207, Free PMC Article
    4. Genetic architecture of natural variation in cuticular hydrocarbon composition in Drosophila melanogaster. Dembeck LM, et al. Elife, 2015 Nov 14. PMID 26568309, Free PMC Article
    5. A conserved role for Snail as a potentiator of active transcription. Rembold M, et al. Genes Dev, 2014 Jan 15. PMID 24402316, Free PMC Article

    See all (42) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables 2-oxoglutarate-dependent dioxygenase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    Phytanoyl-CoA dioxygenase domain containing 1
    Names
    CG14688-PB
    Phyhd1-PB
    NP_001097740.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      10677737..10680925 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001104270.2 → NP_001097740.1  Phytanoyl-CoA dioxygenase domain containing 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097740.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VGY8
      Conserved Domains (1) summary
      pfam05721
      Location:9 → 252
      PhyH; Phytanoyl-CoA dioxygenase (PhyH)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VGY8 Q9VGY8

    Gene LinkOut

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