U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG12290 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43182, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG12290provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039419
    Locus tag
    Dmel_CG12290
    See related
    AllianceGenome:FB:FBgn0039419
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0170980.49; anon-WO0170980.50; Dmel\CG12290; lincRNA.S7704
    Summary
    Predicted to enable G protein-coupled receptor activity and dopamine neurotransmitter receptor activity, coupled via Gi/Go. Predicted to be involved in adenylate cyclase-activating adrenergic receptor signaling pathway and positive regulation of MAPK cascade. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in organism; spermatozoon; and yolk nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CG12290 in Genome Data Viewer
    Location:
    97A6-97A6; 3-90 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (26230248..26234700)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (22055970..22060422)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44320 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46061 Neighboring gene long non-coding RNA:CR46062 Neighboring gene antisense RNA:CR44321 Neighboring gene Aldolase 1

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables G protein-coupled receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables octopamine receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in G protein-coupled receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of MAPK cascade IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG12290-PA
    CG12290-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      26230248..26234700
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300611.1NP_001287540.1  uncharacterized protein Dmel_CG12290, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287540.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VBG4
      Conserved Domains (1) summary
      pfam00001
      Location:190305
      7tm_1; 7 transmembrane receptor (rhodopsin family)
    2. NM_143213.4NP_651470.1  uncharacterized protein Dmel_CG12290, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651470.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VBG4
      Related
      FBpp0084363
      Conserved Domains (1) summary
      pfam00001
      Location:190305
      7tm_1; 7 transmembrane receptor (rhodopsin family)