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    slif slimfast [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40510, updated on 9-Dec-2024

    Summary

    Official Symbol
    slifprovided by FlyBase
    Official Full Name
    slimfastprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037203
    Locus tag
    Dmel_CG11128
    See related
    AllianceGenome:FB:FBgn0037203
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11128; Dmel\CG11128; Slif; SLIF; SLIMFAST
    Summary
    Enables basic amino acid transmembrane transporter activity. Involved in amino acid import across plasma membrane; lipid homeostasis; and regulation of growth. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including anterior-posterior subdivision of organism; embryonic salivary gland duct; embryonic/larval fat body; embryonic/larval salivary gland common duct; and gland. Orthologous to human SLC7A1 (solute carrier family 7 member 1); SLC7A2 (solute carrier family 7 member 2); and SLC7A3 (solute carrier family 7 member 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See slif in Genome Data Viewer
    Location:
    80B2-80B2; 3-47 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (22881045..22893821)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (22874145..22886921)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45968 Neighboring gene uncharacterized protein Neighboring gene Chromator Neighboring gene antisense RNA:CR45970 Neighboring gene Suppressor of stem-loop mutation Neighboring gene long non-coding RNA:CR44688 Neighboring gene long non-coding RNA:CR44689

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    mobile_element

    • Loc: 22883443-22883529 mobile_element_type = transposon:INE-1{}2694
    • Loc: 22884585-22884738 mobile_element_type = transposon:INE-1{}2695
    • Loc: 22890587-22890811 mobile_element_type = transposon:INE-1{}2700

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables L-arginine transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables L-lysine transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables L-ornithine transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables basic amino acid transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IC
    Inferred by Curator
    more info
    PubMed 

    General protein information

    Preferred Names
    slimfast
    Names
    CG11128-PA
    CG11128-PB
    CG11128-PC
    slif-PA
    slif-PB
    slif-PC
    slim fast

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      22881045..22893821
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_168977.2NP_730764.1  slimfast, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730764.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNP7
      Related
      FBpp0078206
      Conserved Domains (2) summary
      TIGR00906
      Location:8557
      2A0303; cationic amino acid transport permease
      pfam13906
      Location:507557
      AA_permease_C; C-terminus of AA_permease
    2. NM_141171.3NP_649428.1  slimfast, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649428.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNP7
      Related
      FBpp0078207
      Conserved Domains (2) summary
      TIGR00906
      Location:8557
      2A0303; cationic amino acid transport permease
      pfam13906
      Location:507557
      AA_permease_C; C-terminus of AA_permease
    3. NM_168978.2NP_730765.1  slimfast, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730765.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNP7
      Related
      FBpp0078208
      Conserved Domains (2) summary
      TIGR00906
      Location:8557
      2A0303; cationic amino acid transport permease
      pfam13906
      Location:507557
      AA_permease_C; C-terminus of AA_permease