U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG15312 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31940, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG15312provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030174
    Locus tag
    Dmel_CG15312
    See related
    AllianceGenome:FB:FBgn0030174
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CT35293; Dmel\CG15312
    Summary
    Predicted to be active in neuron projection. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG15312 in Genome Data Viewer
    Location:
    9B1-9B1; 1-31 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10055629..10070868, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (9949662..9964901, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45601 Neighboring gene Yolk protein 2 Neighboring gene Yolk protein 1 Neighboring gene Gustatory receptor 9a Neighboring gene long non-coding RNA:CR45602 Neighboring gene ZAP3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The MTE, a new core promoter element for transcription by RNA polymerase II. Lim CY, et al. Genes Dev, 2004 Jul 1. PMID 15231738, Free PMC Article
    2. Coordination of alternative splicing and alternative polyadenylation revealed by targeted long read sequencing. Zhang Z, et al. Nat Commun, 2023 Sep 7. PMID 37679364, Free PMC Article
    3. Quantitative trait loci affecting starvation resistance in Drosophila melanogaster. Harbison ST, et al. Genetics, 2004 Apr. PMID 15126400, Free PMC Article
    4. Spatial and temporal control of gene expression in Drosophila using the inducible GeneSwitch GAL4 system. I. Screen for larval nervous system drivers. Nicholson L, et al. Genetics, 2008 Jan. PMID 18202369, Free PMC Article
    5. Genetic basis of wing morphogenesis in Drosophila: sexual dimorphism and non-allometric effects of shape variation. Carreira VP, et al. BMC Dev Biol, 2011 Jun 2. PMID 21635778, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in neuron projection IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG15312-PA
    CG15312-PB
    CG15312-PC
    CG15312-PD
    CG15312-PE
    CG15312-PF

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      10055629..10070868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001258675.2 → NP_001245604.1  uncharacterized protein Dmel_CG15312, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245604.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NG77
      Conserved Domains (2) summary
      smart00408
      Location:40 → 90
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:40 → 90
      IG_like; Immunoglobulin like

    2. NM_167216.3 → NP_727391.1  uncharacterized protein Dmel_CG15312, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727391.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TL2, Q9W2Y8
      Related
      FBpp0071358
      Conserved Domains (2) summary
      smart00408
      Location:40 → 90
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:40 → 90
      IG_like; Immunoglobulin like

    3. NM_001258674.2 → NP_001245603.1  uncharacterized protein Dmel_CG15312, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245603.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NDT2
      Conserved Domains (2) summary
      smart00408
      Location:40 → 90
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:40 → 90
      IG_like; Immunoglobulin like

    4. NM_167215.3 → NP_727390.1  uncharacterized protein Dmel_CG15312, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727390.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TL2, Q9W2Y8
      Related
      FBpp0071357
      Conserved Domains (2) summary
      smart00408
      Location:40 → 90
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:40 → 90
      IG_like; Immunoglobulin like

    5. NM_001258676.2 → NP_001245605.1  uncharacterized protein Dmel_CG15312, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245605.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TL2, Q9W2Y8
      Conserved Domains (2) summary
      smart00408
      Location:40 → 90
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:40 → 90
      IG_like; Immunoglobulin like

    6. NM_132373.4 → NP_572601.1  uncharacterized protein Dmel_CG15312, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572601.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TL2, Q9W2Y8
      Related
      FBpp0071356
      Conserved Domains (2) summary
      smart00408
      Location:40 → 90
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:40 → 90
      IG_like; Immunoglobulin like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9NDT2 M9NDT2
    M9NG77 M9NG77
    Q9W2Y8 Q9W2Y8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous