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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001302152.1 → NP_001289081.1 transcriptional regulator ERG isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has a longer 5' UTR and lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (2) is shorter compared to isoform 1.
- Source sequence(s)
-
AC154691, AK050922, AK078113, BP753340
- Consensus CDS
-
CCDS79495.1
- UniProtKB/TrEMBL
- B7ZND3, B7ZND4
- Related
- ENSMUSP00000156926.2, ENSMUST00000233269.2
- Conserved Domains (2) summary
-
- smart00413
Location:293 → 376
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
-
NM_001302153.1 → NP_001289082.1 transcriptional regulator ERG isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses a downstream alternate 5'-terminal exon which reflects use of an alternate promoter supported by epigenetic data, compared to variant 1. The encoded isoform (3) is shorter and has a distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AC154691, AK078113, AK142379, BB639043, BP753340
- Consensus CDS
-
CCDS79493.1
- UniProtKB/TrEMBL
- B7ZND3, Q3UQJ4
- Related
- ENSMUSP00000114072.4, ENSMUST00000122199.10
- Conserved Domains (2) summary
-
- smart00413
Location:310 → 393
- ETS; erythroblast transformation specific domain
- cl15755
Location:115 → 198
- SAM_superfamily; SAM (Sterile alpha motif )
-
NM_001302154.1 → NP_001289083.1 transcriptional regulator ERG isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses a downstream alternate 5'-terminal exon which reflects use of an alternate promoter supported by epigenetic data, and lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (4) is shorter and has a distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AC154691, AK078113, BB639043, BP753340
- Consensus CDS
-
CCDS79492.1
- UniProtKB/TrEMBL
- A0A384DVA0, B7ZND3
- Related
- ENSMUSP00000156927.2, ENSMUST00000233664.2
- Conserved Domains (2) summary
-
- smart00413
Location:287 → 370
- ETS; erythroblast transformation specific domain
- cl15755
Location:115 → 198
- SAM_superfamily; SAM (Sterile alpha motif )
-
NM_001302179.1 → NP_001289108.1 transcriptional regulator ERG isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (5) is shorter compared to isoform 1.
- Source sequence(s)
-
AC154691, AK050922, AK078113, BP753340
- Consensus CDS
-
CCDS79496.1
- UniProtKB/TrEMBL
-
B7ZND3
- Related
- ENSMUSP00000109479.5, ENSMUST00000113848.11
- Conserved Domains (2) summary
-
- smart00413
Location:294 → 377
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
-
NM_001302183.1 → NP_001289112.1 transcriptional regulator ERG isoform 6
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks two alternate in-frame exons in the 3' coding region, compared to variant 1. The encoded isoform (6) is shorter compared to isoform 1.
- Source sequence(s)
-
AC154691, AK050922, AK078113, BP753340
- Consensus CDS
-
CCDS79494.1
- UniProtKB/TrEMBL
- B7ZND3, E9PY05
- Related
- ENSMUSP00000132766.2, ENSMUST00000171646.10
- Conserved Domains (2) summary
-
- smart00413
Location:270 → 353
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
-
NM_133659.3 → NP_598420.1 transcriptional regulator ERG isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC154691, AK050922, AK078113, BP753340
- Consensus CDS
-
CCDS37411.1
- UniProtKB/Swiss-Prot
- A6H6E7, P81270, Q8C5L4, Q920K7, Q920K8, Q920K9
- UniProtKB/TrEMBL
-
B7ZND3
- Related
- ENSMUSP00000156669.2, ENSMUST00000233881.2
- Conserved Domains (2) summary
-
- smart00413
Location:317 → 400
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
95160028..95387452 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006522895.3 → XP_006522958.1 transcriptional regulator ERG isoform X2
- UniProtKB/Swiss-Prot
- A6H6E7, P81270, Q8C5L4, Q920K7, Q920K8, Q920K9
- UniProtKB/TrEMBL
-
B7ZND3
- Conserved Domains (2) summary
-
- smart00413
Location:317 → 400
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_006522903.3 → XP_006522966.1 transcriptional regulator ERG isoform X6
- UniProtKB/TrEMBL
- B7ZND3, E9PY05
- Conserved Domains (2) summary
-
- smart00413
Location:270 → 353
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_006522900.3 → XP_006522963.1 transcriptional regulator ERG isoform X4
- UniProtKB/TrEMBL
- B7ZND3, B7ZND4
- Conserved Domains (2) summary
-
- smart00413
Location:293 → 376
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_006522899.3 → XP_006522962.1 transcriptional regulator ERG isoform X3
- UniProtKB/TrEMBL
-
B7ZND3
- Conserved Domains (2) summary
-
- smart00413
Location:294 → 377
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_006522894.3 → XP_006522957.1 transcriptional regulator ERG isoform X2
- UniProtKB/Swiss-Prot
- A6H6E7, P81270, Q8C5L4, Q920K7, Q920K8, Q920K9
- UniProtKB/TrEMBL
-
B7ZND3
- Conserved Domains (2) summary
-
- smart00413
Location:317 → 400
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_006522896.5 → XP_006522959.1 transcriptional regulator ERG isoform X2
- UniProtKB/Swiss-Prot
- A6H6E7, P81270, Q8C5L4, Q920K7, Q920K8, Q920K9
- UniProtKB/TrEMBL
-
B7ZND3
- Conserved Domains (2) summary
-
- smart00413
Location:317 → 400
- ETS; erythroblast transformation specific domain
- cl15755
Location:122 → 205
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_030248973.2 → XP_030104833.1 transcriptional regulator ERG isoform X7
- UniProtKB/TrEMBL
-
B7ZND3
- Conserved Domains (2) summary
-
- smart00413
Location:263 → 346
- ETS; erythroblast transformation specific domain
- cl15755
Location:115 → 198
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_030248972.2 → XP_030104832.1 transcriptional regulator ERG isoform X5
- UniProtKB/TrEMBL
- B7ZND3, I1E4Y2
- Related
- ENSMUSP00000113723.5, ENSMUST00000121809.11
- Conserved Domains (2) summary
-
- smart00413
Location:286 → 369
- ETS; erythroblast transformation specific domain
- cl15755
Location:115 → 198
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_006522904.5 → XP_006522967.1 transcriptional regulator ERG isoform X8
- UniProtKB/TrEMBL
-
H3BKX4
- Related
- ENSMUSP00000135568.4, ENSMUST00000176345.10
- Conserved Domains (2) summary
-
- smart00413
Location:278 → 361
- ETS; erythroblast transformation specific domain
- cl15755
Location:83 → 166
- SAM_superfamily; SAM (Sterile alpha motif )
-
XM_036159777.1 → XP_036015670.1 transcriptional regulator ERG isoform X1
- UniProtKB/TrEMBL
-
B7ZND3
- Conserved Domains (2) summary
-
- smart00413
Location:212 → 295
- ETS; erythroblast transformation specific domain
- cl15755
Location:83 → 166
- SAM_superfamily; SAM (Sterile alpha motif )