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    CG1523 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43400, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG1523provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039601
    Locus tag
    Dmel_CG1523
    See related
    AllianceGenome:FB:FBgn0039601
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1523
    Summary
    Predicted to be part of Cul4-RING E3 ubiquitin ligase complex. Is expressed in organism. Orthologous to human DCAF10 (DDB1 and CUL4 associated factor 10). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG1523 in Genome Data Viewer
    Location:
    98E5-98E5; 3-97 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (28817342..28819668, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24643064..24645390, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene wings down Neighboring gene ncRNA Neighboring gene pre-mRNA processing factor 39 Neighboring gene uncharacterized protein Neighboring gene WASp Neighboring gene APC-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Metabolomic analysis of the selection response of Drosophila melanogaster to environmental stress: are there links to gene expression and phenotypic traits? Malmendal A, et al. Naturwissenschaften, 2013 May. PMID 23571708
    2. Adaptive evolution of genes duplicated from the Drosophila pseudoobscura neo-X chromosome. Meisel RP, et al. Mol Biol Evol, 2010 Aug. PMID 20351054, Free PMC Article
    3. Modifiers of muscle and heart cell fate specification identified by gain-of-function screen in Drosophila. Bidet Y, et al. Mech Dev, 2003 Sep. PMID 14550529
    4. Genes Relocated Between Drosophila Chromosome Arms Evolve Under Relaxed Selective Constraints Relative to Non-Relocated Genes. Hart MLI, et al. J Mol Evol, 2018 Jul. PMID 29926120
    5. A targeted gain-of-function screen identifies genes affecting salivary gland morphogenesis/tubulogenesis in Drosophila. Maybeck V, et al. Genetics, 2009 Feb. PMID 19064711, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    part_of Cul4-RING E3 ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG1523-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      28817342..28819668 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143378.4 → NP_651635.2  uncharacterized protein Dmel_CG1523 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651635.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q960M2, Q9VAT2
      Related
      FBpp0084724
      Conserved Domains (3) summary
      COG2319
      Location:45 → 218
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:51 → 87
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:43 → 235
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VAT2.1 Q9VAT2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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