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    CG31460 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 318747, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG31460provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051460
    Locus tag
    Dmel_CG31460
    See related
    AllianceGenome:FB:FBgn0051460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE67710; CG11745; Dmel\CG31460
    Summary
    Predicted to be involved in protein N-linked glycosylation. Predicted to be part of oligosaccharyltransferase complex. Is expressed in adult heart. Orthologous to human KRTCAP2 (keratinocyte associated protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG31460 in Genome Data Viewer
    Location:
    85A3-85A3; 3-48 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (8562673..8563445)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (4388395..4389167)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR44291 Neighboring gene mitochondrial ribosomal protein S18A Neighboring gene pachytene checkpoint 2 Neighboring gene Centromeric protein-C Neighboring gene 5-hydroxytryptamine (serotonin) receptor 2B Neighboring gene long non-coding RNA:CR46124

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic interactions of separase regulatory subunits reveal the diverged Drosophila Cenp-C homolog. Heeger S, et al. Genes Dev, 2005 Sep 1. PMID 16140985, Free PMC Article
    2. The ribosomal protein genes and Minute loci of Drosophila melanogaster. Marygold SJ, et al. Genome Biol, 2007. PMID 17927810, Free PMC Article
    3. A Comprehensive Drosophila melanogaster Transcription Factor Interactome. Shokri L, et al. Cell Rep, 2019 Apr 16. PMID 30995488, Free PMC Article
    4. A large-scale, in vivo transcription factor screen defines bivalent chromatin as a key property of regulatory factors mediating Drosophila wing development. Schertel C, et al. Genome Res, 2015 Apr. PMID 25568052, Free PMC Article
    5. Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis. Lin WH, et al. Dis Model Mech, 2017 Feb 1. PMID 28067623, Free PMC Article

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of oligosaccharyltransferase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31460-PA
    CG31460-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      8562673..8563445
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300307.1 → NP_001287236.1  uncharacterized protein Dmel_CG31460, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287236.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8IGM0, Q8INQ7
      UniProtKB/TrEMBL
      A0A0B4LGZ4
      Conserved Domains (1) summary
      pfam09775
      Location:15 → 132
      Keratin_assoc; Keratinocyte-associated protein 2

    2. NM_169227.2 → NP_731253.1  uncharacterized protein Dmel_CG31460, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731253.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8IGM0, Q8INQ7
      UniProtKB/TrEMBL
      A0A0B4LGZ4
      Related
      FBpp0081362
      Conserved Domains (1) summary
      pfam09775
      Location:15 → 132
      Keratin_assoc; Keratinocyte-associated protein 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LGZ4 A0A0B4LGZ4
    Q8INQ7.1 Q8INQ7

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