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    CG31441 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 326139, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG31441provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051441
    Locus tag
    Dmel_CG31441
    See related
    AllianceGenome:FB:FBgn0051441
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5135; Dmel\CG31441
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in organism. Orthologous to human ZNF784 (zinc finger protein 784). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG31441 in Genome Data Viewer
    Location:
    86D8-86D8; 3-50 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11236286..11237624)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7062008..7063346)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Diphthamide biosynthesis 3 Neighboring gene Arfaptin Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene SCP-containing protein B Neighboring gene SCP-containing protein A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic imprinting absent in Drosophila melanogaster adult females. Coolon JD, et al. Cell Rep, 2012 Jul 26. PMID 22840398, Free PMC Article
    2. Twenty-seven ZAD-ZNF genes of Drosophila melanogaster are orthologous to the embryo polarity determining mosquito gene cucoid. Li M, et al. PLoS One, 2023. PMID 36595500, Free PMC Article
    3. Sensory neuron lineage mapping and manipulation in the Drosophila olfactory system. Chai PC, et al. Nat Commun, 2019 Feb 7. PMID 30733440, Free PMC Article
    4. An RNA-interference screen in Drosophila to identify ZAD-containing C2H2 zinc finger genes that function in female germ cells. Shapiro-Kulnane L, et al. G3 (Bethesda), 2021 Jan 18. PMID 33561227, Free PMC Article
    5. ZAD-Domain Is Essential for Nuclear Localization of Insulator Proteins in Drosophila melanogaster. Zolotarev NA, et al. Acta Naturae, 2016 Jul-Sep. PMID 27795848, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables transcription cis-regulatory region binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31441-PA
    CG31441-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11236286..11237624
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300354.1 → NP_001287283.1  uncharacterized protein Dmel_CG31441, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287283.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LI36

    2. NM_169382.2 → NP_731558.1  uncharacterized protein Dmel_CG31441, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731558.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95RJ5, Q9VGQ6
      Related
      FBpp0081831
      Conserved Domains (5) summary
      COG5048
      Location:174 → 337
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:253 → 273
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:197 → 217
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07776
      Location:7 → 82
      zf-AD; Zinc-finger associated domain (zf-AD)
      pfam13465
      Location:268 → 290
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LI36 A0A0B4LI36
    Q9VGQ6 Q9VGQ6

    Gene LinkOut

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