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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001136064.3 → NP_001129536.1 seipin isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) is the longer transcript and encodes the longer isoform (1). Variants 1 and 2 encode the same isoform (1).
- Source sequence(s)
-
AC129217, BC061689, CK618551
- Consensus CDS
-
CCDS29551.2
- UniProtKB/TrEMBL
-
A0A0R4J225
- Related
- ENSMUSP00000127685.2, ENSMUST00000171649.8
- Conserved Domains (2) summary
-
- PHA00666
Location:352 → 417
- PHA00666; putative protease
- pfam06775
Location:99 → 302
- Seipin; Putative adipose-regulatory protein (Seipin)
-
NM_001290823.1 → NP_001277752.1 seipin isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus than isoform 1.
- Source sequence(s)
-
AC129217, AK151606, BY132247
- Consensus CDS
-
CCDS70931.1
- UniProtKB/Swiss-Prot
- Q3TY41, Q3U1S5, Q810B0, Q9JJC2, Q9JMF1, Q9Z2E9
- Related
- ENSMUSP00000083224.7, ENSMUST00000086058.13
- Conserved Domains (2) summary
-
- PTZ00415
Location:285 → 349
- PTZ00415; transmission-blocking target antigen s230; Provisional
- pfam06775
Location:39 → 243
- Seipin; Putative adipose-regulatory protein (Seipin)
-
NM_008144.5 → NP_032170.3 seipin isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same isoform (1).
- Source sequence(s)
-
AC129217, AK158901
- Consensus CDS
-
CCDS29551.2
- UniProtKB/TrEMBL
-
A0A0R4J225
- Conserved Domains (2) summary
-
- PHA00666
Location:352 → 417
- PHA00666; putative protease
- pfam06775
Location:99 → 302
- Seipin; Putative adipose-regulatory protein (Seipin)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000085.7 Reference GRCm39 C57BL/6J
- Range
-
8814831..8826047
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006526691.3 → XP_006526754.1 seipin isoform X1
- UniProtKB/Swiss-Prot
- Q3TY41, Q3U1S5, Q810B0, Q9JJC2, Q9JMF1, Q9Z2E9
- Conserved Domains (2) summary
-
- PTZ00415
Location:285 → 349
- PTZ00415; transmission-blocking target antigen s230; Provisional
- pfam06775
Location:39 → 243
- Seipin; Putative adipose-regulatory protein (Seipin)
-
XM_030250754.1 → XP_030106614.1 seipin isoform X1
- UniProtKB/Swiss-Prot
- Q3TY41, Q3U1S5, Q810B0, Q9JJC2, Q9JMF1, Q9Z2E9
- Related
-
ENSMUST00000162071.8
- Conserved Domains (2) summary
-
- PTZ00415
Location:285 → 349
- PTZ00415; transmission-blocking target antigen s230; Provisional
- pfam06775
Location:39 → 243
- Seipin; Putative adipose-regulatory protein (Seipin)