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    LPP LIM domain containing preferred translocation partner in lipoma [ Homo sapiens (human) ]

    Gene ID: 4026, updated on 27-Nov-2024

    Summary

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    Official Symbol
    LPPprovided by HGNC
    Official Full Name
    LIM domain containing preferred translocation partner in lipomaprovided by HGNC
    Primary source
    HGNC:HGNC:6679
    See related
    Ensembl:ENSG00000145012 MIM:600700; AllianceGenome:HGNC:6679
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    This gene encodes a member of a subfamily of LIM domain proteins that are characterized by an N-terminal proline-rich region and three C-terminal LIM domains. The encoded protein localizes to the cell periphery in focal adhesions and may be involved in cell-cell adhesion and cell motility. This protein also shuttles through the nucleus and may function as a transcriptional co-activator. This gene is located at the junction of certain disease-related chromosomal translocations, which result in the expression of chimeric proteins that may promote tumor growth. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014]
    Expression
    Ubiquitous expression in endometrium (RPKM 14.7), esophagus (RPKM 14.3) and 24 other tissues See more
    Orthologs
    mouse all
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    Genomic context

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    See LPP in Genome Data Viewer
    Location:
    3q27.3-q28
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (188153021..188890671)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (190970544..191707297)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (187870809..188608460)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20974 Neighboring gene Sharpr-MPRA regulatory region 2895 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:187707584-187708117 Neighboring gene uncharacterized LOC107986166 Neighboring gene long intergenic non-protein coding RNA 1991 Neighboring gene Sharpr-MPRA regulatory region 1686 Neighboring gene Sharpr-MPRA regulatory region 10187 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:187769983-187770955 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:187870480-187871380 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14995 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:187873180-187874078 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:187882030-187883229 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:187897095-187897707 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20975 Neighboring gene LPP antisense RNA 2 Neighboring gene uncharacterized LOC401105 Neighboring gene Sharpr-MPRA regulatory region 910 Neighboring gene uncharacterized LOC124906316 Neighboring gene LPP antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:188353620-188354172 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:188354173-188354724 Neighboring gene microRNA 28 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14996 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:188600153-188600654 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:188600655-188601154 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:188618060-188619259 Neighboring gene Sharpr-MPRA regulatory region 14211 Neighboring gene NANOG hESC enhancer GRCh37_chr3:188655166-188655667 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:188655787-188656288 Neighboring gene Sharpr-MPRA regulatory region 11355 Neighboring gene NANOG hESC enhancer GRCh37_chr3:188674939-188675473 Neighboring gene TPRG1 antisense RNA 1 Neighboring gene ENOPH1 pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Contribution of LPP copy number and sequence changes to esophageal atresia, tracheoesophageal fistula, and VACTERL association. Hernández-García A, et al. Am J Med Genet A, 2012 Jul. PMID 22639458
    2. LPP, a LIM protein highly expressed in smooth muscle. Gorenne I, et al. Am J Physiol Cell Physiol, 2003 Sep. PMID 12760907
    3. 3'UTR SNPs in the LPP gene associated with Immunoglobulin A nephropathy risk in the Chinese Han population. Feng Y, et al. Int Immunopharmacol, 2019 Sep. PMID 31295688
    4. Zyxin and paxillin proteins: focal adhesion plaque LIM domain proteins go nuclear. Wang Y, et al. Biochim Biophys Acta, 2003 Feb 17. PMID 12581855
    5. Single nucleotide polymorphism in the 3' untranslated region of LPP is a risk factor for lung cancer: a case-control study. Yan S, et al. BMC Cancer, 2019 Jan 8. PMID 30621612, Free PMC Article

    See all (139) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Association of LPP and ZMIZ1 Gene Polymorphism with Celiac Disease in Subjects from Punjab, Pakistan.
      Title: Association of LPP and ZMIZ1 Gene Polymorphism with Celiac Disease in Subjects from Punjab, Pakistan.
    2. Replication of association at the LPP and UBASH3A loci in a UK autoimmune Addison's disease cohort.
      Title: Replication of association at the LPP and UBASH3A loci in a UK autoimmune Addison's disease cohort.
    3. LPP polymorphisms are risk factors for allergic rhinitis in the Chinese Han population.
      Title: LPP polymorphisms are risk factors for allergic rhinitis in the Chinese Han population.
    4. Case Report: Identification of Potential Prognosis-Related TP53 Mutation and BCL6-LPP Fusion in Primary Pituitary Lymphoma by Next Generation Sequencing: Two Cases.
      Title: Case Report: Identification of Potential Prognosis-Related TP53 Mutation and BCL6-LPP Fusion in Primary Pituitary Lymphoma by Next Generation Sequencing: Two Cases.
    5. LPP rs2378456 CC genotype increased the risk of astrocytoma.
      Title: LPP and RYR2 Gene Polymorphisms Correlate with the Risk and the Prognosis of Astrocytoma.
    6. The results of the stratified analysis showed that LPP SNPs rs3796283 and rs2378456 in the Chinese Han population were connected with susceptibility to Immunoglobulin A nephropathy (IgAN) in different subgroups. Our data may provide new evidence to research the etiology of IgAN.
      Title: 3'UTR SNPs in the LPP gene associated with Immunoglobulin A nephropathy risk in the Chinese Han population.
    7. cancer-associated fibroblasts regulate endothelial LPP via a calcium-dependent signaling pathway involving microfibrillar-associated protein 5 (MFAP5), focal adhesion kinase (FAK), ERK, and LPP
      Title: Cancer-associated fibroblasts regulate endothelial adhesion protein LPP to promote ovarian cancer chemoresistance.
    8. Our results provides evidence for the impact of LPP polymorphisms on the susceptibility to lung cancer in Chinese population
      Title: Single nucleotide polymorphism in the 3' untranslated region of LPP is a risk factor for lung cancer: a case-control study.
    9. Data indicate a function for lipoma preferred partner (LPP) in the formation of invadopodia and a requirement for LPP in mediating the metastatic ability of breast cancer cells.
      Title: LPP is a Src substrate required for invadopodia formation and efficient breast cancer lung metastasis.
    10. This is the first report of epigenetic regulation of the intronic miR-28-5p expression by promoter DNA methylation of its host gene, LPP.
      Title: Epigenetic silencing of LPP/miR-28 in multiple myeloma.
    Submit: New GeneRIF Correction See all GeneRIFs (33)

    Phenotypes

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    Find tests for this gene in the NIH Genetic Testing Registry (GTR)

    Review eQTL and phenotype association data in this region using PheGenI

    EBI GWAS Catalog

    Description
    A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci.
    EBI GWAS Catalog
    A genome-wide association study of plasma total IgE concentrations in the Framingham Heart Study.
    EBI GWAS Catalog
    Association analyses identify three susceptibility Loci for vitiligo in the Chinese Han population.
    EBI GWAS Catalog
    Familial young-onset diabetes, pre-diabetes and cardiovascular disease are associated with genetic variants of DACH1 in Chinese.
    EBI GWAS Catalog
    Genome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
    EBI GWAS Catalog
    Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
    EBI GWAS Catalog
    Genome-wide Association Study Identifies Five Susceptibility Loci for Follicular Lymphoma outside the HLA Region.
    EBI GWAS Catalog
    Genome-wide association study of B cell non-Hodgkin lymphoma identifies 3q27 as a susceptibility locus in the Chinese population.
    EBI GWAS Catalog
    Genome-wide meta-analysis identifies variants associated with platinating agent susceptibility across populations
    EBI GWAS Catalog
    Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility.
    EBI GWAS Catalog
    Linkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
    EBI GWAS Catalog
    Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations.
    EBI GWAS Catalog
    Meta-analysis of genome-wide association studies identifies ten loci influencing allergic sensitization.
    EBI GWAS Catalog
    Multiple common variants for celiac disease influencing immune gene expression.
    EBI GWAS Catalog
    Newly identified genetic risk variants for celiac disease related to the immune response.
    EBI GWAS Catalog
    Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
    EBI GWAS Catalog
    Variant of TYR and autoimmunity susceptibility loci in generalized vitiligo.
    EBI GWAS Catalog
    White matter integrity as an intermediate phenotype: exploratory genome-wide association analysis in individuals at high risk of bipolar disorder.
    EBI GWAS Catalog

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    HIV-1 interactions

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    Replication interactions

    Interaction Pubs
    Knockdown of LIM domain containing preferred translocation partner in lipoma (LPP) by siRNA enhances HIV-1 replication in CD4+/CCR5+/CXCR4+ TZM-bl HeLa cells PubMed

    Go to the HIV-1, Human Interaction Database

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Clone Names

    • FLJ30652, FLJ41512, DKFZp779O0231

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		  
    located_in focal adhesion HDA PubMed 
    is_active_in focal adhesion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in focal adhesion IDA
    Inferred from Direct Assay
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in stress fiber IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    lipoma-preferred partner
    Names
    LIM protein
    lipoma preferred partner

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_016932.2 RefSeqGene

      Range
      5283..741797
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001167671.3 → NP_001161143.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    2. NM_001167672.3 → NP_001161144.1  lipoma-preferred partner isoform b

      Status: REVIEWED

      Source sequence(s)
      AC009319, AI126032, AK304035, AW301088, CD697098, KF510228
      UniProtKB/TrEMBL
      B7Z8W0
      Conserved Domains (3) summary
      cd09350
      Location:269 → 322
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:329 → 381
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cl02475
      Location:389 → 454
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    3. NM_001375455.1 → NP_001362384.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    4. NM_001375456.1 → NP_001362385.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    5. NM_001375457.1 → NP_001362386.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    6. NM_001375458.1 → NP_001362387.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Related
      ENSP00000392667.2, ENST00000414139.6
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    7. NM_001375459.1 → NP_001362388.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    8. NM_001375460.1 → NP_001362389.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    9. NM_001375461.1 → NP_001362390.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    10. NM_001375462.1 → NP_001362391.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Related
      ENSP00000478901.1, ENST00000617246.5
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    11. NM_001375463.1 → NP_001362392.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    12. NM_001375464.1 → NP_001362393.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    13. NM_001375465.1 → NP_001362394.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Related
      ENSP00000405138.2, ENST00000420410.6
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    14. NM_001387663.1 → NP_001374592.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    15. NM_001387664.1 → NP_001374593.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    16. NM_001387665.1 → NP_001374594.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    17. NM_001387666.1 → NP_001374595.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    18. NM_001387667.1 → NP_001374596.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    19. NM_001387668.1 → NP_001374597.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    20. NM_001387669.1 → NP_001374598.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    21. NM_001387670.1 → NP_001374599.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    22. NM_001387671.1 → NP_001374600.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    23. NM_001387672.1 → NP_001374601.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    24. NM_001387673.1 → NP_001374602.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    25. NM_001387674.1 → NP_001374603.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    26. NM_001387675.1 → NP_001374604.1  lipoma-preferred partner isoform c

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC055711, AC063932, KF510228
      UniProtKB/TrEMBL
      B7Z871
      Conserved Domains (4) summary
      cd09350
      Location:253 → 306
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:313 → 365
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PRK14086
      Location:28 → 217
      dnaA; chromosomal replication initiator protein DnaA
      cl02475
      Location:373 → 438
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    27. NM_001387676.1 → NP_001374605.1  lipoma-preferred partner isoform c

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC055711, AC063932, KF510228
      UniProtKB/TrEMBL
      B7Z871
      Conserved Domains (4) summary
      cd09350
      Location:253 → 306
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:313 → 365
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PRK14086
      Location:28 → 217
      dnaA; chromosomal replication initiator protein DnaA
      cl02475
      Location:373 → 438
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    28. NM_001387677.1 → NP_001374606.1  lipoma-preferred partner isoform d

      Status: REVIEWED

      Source sequence(s)
      AC022498, AC063932, AC069226, AC117507
      UniProtKB/TrEMBL
      C9JUT4
      Conserved Domains (2) summary
      PRK14086
      Location:191 → 370
      dnaA; chromosomal replication initiator protein DnaA
      PRK14971
      Location:141 → 219
      PRK14971; DNA polymerase III subunit gamma/tau

    29. NM_001387678.1 → NP_001374607.1  lipoma-preferred partner isoform d

      Status: REVIEWED

      Source sequence(s)
      AC022498, AC063932, AC069226, AC117507
      UniProtKB/TrEMBL
      C9JUT4
      Conserved Domains (2) summary
      PRK14086
      Location:191 → 370
      dnaA; chromosomal replication initiator protein DnaA
      PRK14971
      Location:141 → 219
      PRK14971; DNA polymerase III subunit gamma/tau

    30. NM_001387679.1 → NP_001374608.1  lipoma-preferred partner isoform d

      Status: REVIEWED

      Source sequence(s)
      AC022498, AC063932, AC069226, AC117507
      UniProtKB/TrEMBL
      C9JUT4
      Conserved Domains (2) summary
      PRK14086
      Location:191 → 370
      dnaA; chromosomal replication initiator protein DnaA
      PRK14971
      Location:141 → 219
      PRK14971; DNA polymerase III subunit gamma/tau

    31. NM_001387680.1 → NP_001374609.1  lipoma-preferred partner isoform d

      Status: REVIEWED

      Source sequence(s)
      AC022498, AC063932, AC069226, AC117507
      UniProtKB/TrEMBL
      C9JUT4
      Conserved Domains (2) summary
      PRK14086
      Location:191 → 370
      dnaA; chromosomal replication initiator protein DnaA
      PRK14971
      Location:141 → 219
      PRK14971; DNA polymerase III subunit gamma/tau

    32. NM_001387681.1 → NP_001374610.1  lipoma-preferred partner isoform d

      Status: REVIEWED

      Source sequence(s)
      AC022498, AC063932, AC069226, AC117507
      UniProtKB/TrEMBL
      C9JUT4
      Conserved Domains (2) summary
      PRK14086
      Location:191 → 370
      dnaA; chromosomal replication initiator protein DnaA
      PRK14971
      Location:141 → 219
      PRK14971; DNA polymerase III subunit gamma/tau

    33. NM_001387682.1 → NP_001374611.1  lipoma-preferred partner isoform d

      Status: REVIEWED

      Source sequence(s)
      AC022498, AC063932, AC069226, AC117507
      UniProtKB/TrEMBL
      C9JUT4
      Conserved Domains (2) summary
      PRK14086
      Location:191 → 370
      dnaA; chromosomal replication initiator protein DnaA
      PRK14971
      Location:141 → 219
      PRK14971; DNA polymerase III subunit gamma/tau

    34. NM_001387683.1 → NP_001374612.1  lipoma-preferred partner isoform d

      Status: REVIEWED

      Source sequence(s)
      AC022498, AC063932, AC069226
      UniProtKB/TrEMBL
      C9JUT4
      Conserved Domains (2) summary
      PRK14086
      Location:191 → 370
      dnaA; chromosomal replication initiator protein DnaA
      PRK14971
      Location:141 → 219
      PRK14971; DNA polymerase III subunit gamma/tau

    35. NM_005578.5 → NP_005569.1  lipoma-preferred partner isoform a

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228
      Consensus CDS
      CCDS3291.1
      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Related
      ENSP00000482617.2, ENST00000618621.5
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    RNA

    1. NR_164692.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AC009319, AC022498, AC055711, AC063932, AC069226, AC117507, KF510228

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      188153021..188890671
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047448103.1 → XP_047304059.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    2. XM_047448109.1 → XP_047304065.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    3. XM_047448102.1 → XP_047304058.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    4. XM_047448112.1 → XP_047304068.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    5. XM_047448107.1 → XP_047304063.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    6. XM_047448115.1 → XP_047304071.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    7. XM_047448105.1 → XP_047304061.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    8. XM_047448097.1 → XP_047304053.1  lipoma-preferred partner isoform X1

    9. XM_047448099.1 → XP_047304055.1  lipoma-preferred partner isoform X4

    10. XM_047448104.1 → XP_047304060.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    11. XM_047448108.1 → XP_047304064.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    12. XM_047448114.1 → XP_047304070.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    13. XM_047448106.1 → XP_047304062.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    14. XM_047448113.1 → XP_047304069.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    15. XM_047448111.1 → XP_047304067.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    16. XM_047448101.1 → XP_047304057.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    17. XM_047448110.1 → XP_047304066.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    18. XM_047448098.1 → XP_047304054.1  lipoma-preferred partner isoform X2

    19. XM_017006378.2 → XP_016861867.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052
      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:416 → 469
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:476 → 528
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:536 → 601
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      PHA03247
      Location:19 → 388
      PHA03247; large tegument protein UL36; Provisional

    20. XM_047448116.1 → XP_047304072.1  lipoma-preferred partner isoform X7

    21. XM_017006381.1 → XP_016861870.1  lipoma-preferred partner isoform X8

      UniProtKB/TrEMBL
      C9JUT4
      Related
      ENSP00000393602.1, ENST00000448637.5
      Conserved Domains (2) summary
      PRK14086
      Location:191 → 380
      dnaA; chromosomal replication initiation protein; Provisional
      PRK14971
      Location:141 → 219
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional

    22. XM_011512823.3 → XP_011511125.1  lipoma-preferred partner isoform X3

      UniProtKB/TrEMBL
      B7ZLW0
      Conserved Domains (4) summary
      cd09350
      Location:441 → 494
      LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09356
      Location:501 → 553
      LIM2_TRIP6; The second LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cd09436
      Location:561 → 626
      LIM3_TRIP6; The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
      cl23807
      Location:229 → 316
      WWbp; WW-domain ligand protein

    23. XM_047448100.1 → XP_047304056.1  lipoma-preferred partner isoform X5

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      190970544..191707297
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054346494.1 → XP_054202469.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    2. XM_054346500.1 → XP_054202475.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    3. XM_054346493.1 → XP_054202468.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    4. XM_054346502.1 → XP_054202477.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    5. XM_054346498.1 → XP_054202473.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    6. XM_054346505.1 → XP_054202480.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    7. XM_054346496.1 → XP_054202471.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    8. XM_054346487.1 → XP_054202462.1  lipoma-preferred partner isoform X1

    9. XM_054346490.1 → XP_054202465.1  lipoma-preferred partner isoform X4

    10. XM_054346495.1 → XP_054202470.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    11. XM_054346499.1 → XP_054202474.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    12. XM_054346504.1 → XP_054202479.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    13. XM_054346497.1 → XP_054202472.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    14. XM_054346503.1 → XP_054202478.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    15. XM_054346501.1 → XP_054202476.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    16. XM_054346492.1 → XP_054202467.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    17. XM_054346488.1 → XP_054202463.1  lipoma-preferred partner isoform X2

    18. XM_054346507.1 → XP_054202482.1  lipoma-preferred partner isoform X6

      UniProtKB/Swiss-Prot
      A1L4L6, D3DNV6, Q8NFX5, Q93052

    19. XM_054346506.1 → XP_054202481.1  lipoma-preferred partner isoform X7

    20. XM_054346508.1 → XP_054202483.1  lipoma-preferred partner isoform X8

    21. XM_054346489.1 → XP_054202464.1  lipoma-preferred partner isoform X3

    22. XM_054346491.1 → XP_054202466.1  lipoma-preferred partner isoform X5

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93052.1 GenPept UniProtKB/Swiss-Prot:Q93052

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