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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051075.2 RefSeqGene
- Range
-
5000..75705
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001301732.3 → NP_001288661.2 ribosome quality control complex subunit NEMF isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AL591767, AL627171, KF459555
- UniProtKB/TrEMBL
-
G3V5V3
- Conserved Domains (2) summary
-
- COG1293
Location:1 → 623
- YloA; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains [Translation, ribosomal structure and biogenesis]
- cl22451
Location:637 → 755
- ASF1_hist_chap; ASF1 like histone chaperone
-
NM_004713.6 → NP_004704.3 ribosome quality control complex subunit NEMF isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AL591767, AL627171, KF459555
- Consensus CDS
-
CCDS9694.1
- UniProtKB/Swiss-Prot
- A0JLQ3, B3KSK1, B4DDL3, B4DHA9, B4E3F3, O60524, Q32Q66, Q8WW70, Q9NWG1
- UniProtKB/TrEMBL
-
G3V5V3
- Related
- ENSP00000298310.5, ENST00000298310.10
- Conserved Domains (3) summary
-
- COG1293
Location:1 → 644
- YloA; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains [Translation, ribosomal structure and biogenesis]
- pfam11923
Location:968 → 1067
- DUF3441; Domain of unknown function (DUF3441)
- cl22451
Location:658 → 776
- ASF1_hist_chap; ASF1 like histone chaperone
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
49782083..49852788 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047431912.1 → XP_047287868.1 ribosome quality control complex subunit NEMF isoform X2
- UniProtKB/TrEMBL
-
G3V5V3
-
XM_017021761.2 → XP_016877250.1 ribosome quality control complex subunit NEMF isoform X2
- UniProtKB/TrEMBL
-
G3V5V3
- Conserved Domains (4) summary
-
- COG1293
Location:49 → 415
- YloA; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains [Translation, ribosomal structure and biogenesis]
- pfam05670
Location:303 → 377
- DUF814; Domain of unknown function (DUF814)
- pfam11923
Location:739 → 838
- DUF3441; Domain of unknown function (DUF3441)
- cl22451
Location:429 → 547
- ASF1_hist_chap; ASF1 like histone chaperone
-
XM_047431911.1 → XP_047287867.1 ribosome quality control complex subunit NEMF isoform X1
- UniProtKB/TrEMBL
-
G3V5V3
- Related
- ENSP00000452540.1, ENST00000555970.5
-
XM_011537317.4 → XP_011535619.1 ribosome quality control complex subunit NEMF isoform X3
- Conserved Domains (2) summary
-
- COG1293
Location:1 → 580
- YloA; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains [Translation, ribosomal structure and biogenesis]
- pfam05670
Location:532 → 582
- DUF814; Domain of unknown function (DUF814)
-
XM_011537318.4 → XP_011535620.1 ribosome quality control complex subunit NEMF isoform X4
- Conserved Domains (1) summary
-
- cl40653
Location:1 → 400
- FbpA; Fibronectin-binding protein A N-terminus (FbpA)
RNA
-
XR_943557.4 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
43987877..44058011 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054376963.1 → XP_054232938.1 ribosome quality control complex subunit NEMF isoform X2
- UniProtKB/TrEMBL
-
G3V5V3
-
XM_054376964.1 → XP_054232939.1 ribosome quality control complex subunit NEMF isoform X2
- UniProtKB/TrEMBL
-
G3V5V3
-
XM_054376962.1 → XP_054232937.1 ribosome quality control complex subunit NEMF isoform X1
- UniProtKB/TrEMBL
-
G3V5V3
-
XM_054376965.1 → XP_054232940.1 ribosome quality control complex subunit NEMF isoform X3
-
XM_054376966.1 → XP_054232941.1 ribosome quality control complex subunit NEMF isoform X4
RNA
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XR_008488899.1 RNA Sequence