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    LINC02876 long intergenic non-protein coding RNA 2876 [ Homo sapiens (human) ]

    Gene ID: 100506650, updated on 10-Dec-2024

    Summary

    Official Symbol
    LINC02876provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2876provided by HGNC
    Primary source
    HGNC:HGNC:42963
    See related
    Ensembl:ENSG00000226364 AllianceGenome:HGNC:42963
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C17orf112
    Expression
    Restricted expression toward testis (RPKM 3.7) See more
    Orthologs
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    Genomic context

    See LINC02876 in Genome Data Viewer
    Location:
    17q22
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (52985505..52987652)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (53860727..53862875)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (51062865..51065012)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2089 Neighboring gene uncharacterized LOC107984983 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:51123434-51123934 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr17:51138562-51139451 Neighboring gene MT-CO1 pseudogene 40 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:51219872-51220372 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:51220373-51220873 Neighboring gene phosphatidylinositol 4-kinase type 2 alpha pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_164143.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC102948
      Related
      ENST00000623702.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      52985505..52987652
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      53860727..53862875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)