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    hofC inner membrane protein HofC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945806, updated on 3-Dec-2024

    Summary

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    Official Symbol
    hofC
    Official Full Name
    inner membrane protein HofC
    Primary source
    ECOCYC:EG11798
    Locus tag
    b0106
    See related
    ASAP:ABE-0000366
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0105; hopC; yacD
    Summary
    hofC is a homolog of pilC from Pseudomonas aeruginosa which is involved in type-IV pilus assembly . [More information is available at EcoCyc: EG11798].
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    Genomic context

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    Sequence:
    NC_000913.3 (114522..115724, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YacM Neighboring gene GMP reductase Neighboring gene T2SSE family protein Neighboring gene prepilin-type N-terminal cleavage/methylation domain-containing protein PpdD Neighboring gene quinolinate phosphoribosyltransferase (decarboxylating)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide sequence of the gene encoding the GMP reductase of Escherichia coli K12. Andrews SC, et al. Biochem J, 1988 Oct 1. PMID 2904262, Free PMC Article
    2. Chromosomal genes essential for stable maintenance of the mini-F plasmid in Escherichia coli. Niki H, et al. J Bacteriol, 1988 Nov. PMID 3053654, Free PMC Article
    3. PpdD type IV pilin of Escherichia coli K-12 can Be assembled into pili in Pseudomonas aeruginosa. Sauvonnet N, et al. J Bacteriol, 2000 Feb. PMID 10633126, Free PMC Article
    4. Escherichia coli contains a set of genes homologous to those involved in protein secretion, DNA uptake and the assembly of type-4 fimbriae in other bacteria. Whitchurch CB, et al. Gene, 1994 Dec 2. PMID 7959070
    5. Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. Fujita N, et al. Nucleic Acids Res, 1994 May 11. PMID 8202364, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in protein secretion IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein secretion by the type II secretion system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inner membrane protein HofC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      114522..115724 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414648.1 inner membrane protein HofC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414648.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N8NDX2
      Conserved Domains (1) summary
      PRK10573
      Location:1 → 397
      PRK10573; protein transport protein HofC
    Nucleotide Protein
    Heading Accession and Version

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