U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yceK DUF1375 domain-containing lipoprotein YceK [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945613, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yceK
    Official Full Name
    DUF1375 domain-containing lipoprotein YceK
    Primary source
    ECOCYC:EG12689
    Locus tag
    b1050
    See related
    ASAP:ABE-0003565
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1036
    Summary
    Repressed during biofilm formation. yceK and yidQ are paralogs. [More information is available at EcoGene: EG12689].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (1113579..1113806)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene osmoregulated periplasmic glucans (OPG) biosynthesis protein C Neighboring gene osmoregulated periplasmic glucans biosynthesis protein G Neighboring gene osmoregulated periplasmic glucans biosynthesis protein H Neighboring gene acidic protein MsyB Neighboring gene efflux pump MdtG

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Homology between a genetic locus (mdoA) involved in the osmoregulated biosynthesis of periplasmic glucans in Escherichia coli and a genetic locus (hrpM) controlling pathogenicity of Pseudomonas syringae. Loubens I, et al. Mol Microbiol, 1993 Oct. PMID 7934824
    2. Multicopy suppression: an approach to understanding intracellular functioning of the protein export system. Ueguchi C, et al. J Bacteriol, 1992 Mar. PMID 1537791, Free PMC Article
    3. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
    4. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
    5. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF1375 domain-containing lipoprotein YceK

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1113579..1113806
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415568.1 DUF1375 domain-containing lipoprotein YceK [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415568.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AKY8
      Conserved Domains (1) summary
      PRK10175
      Location:1 → 75
      PRK10175; YceK/YidQ family lipoprotein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.