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    yeeY putative DNA-binding transcriptional regulator YeeY [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946532, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yeeY
    Official Full Name
    putative DNA-binding transcriptional regulator YeeY
    Primary source
    ECOCYC:G7088
    Locus tag
    b2015
    See related
    ASAP:ABE-0006700
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2009
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    Genomic context

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    Sequence:
    NC_000913.3 (2087329..2088258, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene thiosulfate transporter Neighboring gene putrescine:H(+) symporter PlaP Neighboring gene uncharacterized protein YoeI Neighboring gene putative epimerase YeeZ Neighboring gene ribosome-dependent mRNA interferase toxin YoeB Neighboring gene YefM antitoxin of the YoeB-YefM toxin-antitoxin pair and DNA binding transcriptional repressor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
    2. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
    3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transcription cis-regulatory region binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative DNA-binding transcriptional regulator YeeY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2087329..2088258 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416519.4 putative DNA-binding transcriptional regulator YeeY [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416519.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T6BNB4
      Conserved Domains (2) summary
      CHL00180
      Location:5 → 148
      rbcR; LysR transcriptional regulator; Provisional
      cl21456
      Location:94 → 289
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
    Nucleotide Protein
    Heading Accession and Version

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