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    Triap1 TP53 regulated inhibitor of apoptosis 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 691278, updated on 9-Dec-2024

    Summary

    Symbol
    Triap1provided by RGD
    Full Name
    TP53 regulated inhibitor of apoptosis 1provided by RGD
    Primary source
    RGD:1586233
    See related
    EnsemblRapid:ENSRNOG00000001160 AllianceGenome:RGD:1586233
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable p53 binding activity. Predicted to contribute to phosphatidic acid transfer activity. Predicted to be involved in several processes, including DNA damage response, signal transduction by p53 class mediator; negative regulation of apoptotic process; and positive regulation of phospholipid transport. Predicted to be located in mitochondrion and nucleoplasm. Predicted to be part of protein-containing complex. Predicted to be active in mitochondrial intermembrane space and nucleus. Orthologous to human TRIAP1 (TP53 regulated inhibitor of apoptosis 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 172.5), Muscle (RPKM 149.9) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Triap1 in Genome Data Viewer
    Location:
    12q16
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (46928273..46930766, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (41267534..41270053, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (46987404..46989906, complement)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene musashi RNA-binding protein 1 Neighboring gene transmembrane protein 258, pseudogene 2 Neighboring gene cytochrome c oxidase subunit 6A1 Neighboring gene glutamyl-tRNA amidotransferase subunit C Neighboring gene serine and arginine rich splicing factor 9

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables p53 binding ISO
    Inferred from Sequence Orthology
    more info
     
    contributes_to phosphatidic acid transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    contributes_to phosphatidic acid transfer activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in mitochondrial intermembrane space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrial intermembrane space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    TP53-regulated inhibitor of apoptosis 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126099.1NP_001119571.1  TP53-regulated inhibitor of apoptosis 1

      See identical proteins and their annotated locations for NP_001119571.1

      Status: VALIDATED

      Source sequence(s)
      CH473973
      UniProtKB/TrEMBL
      A6J1U8, D3ZY71
      Related
      ENSRNOP00000001534.2, ENSRNOT00000001534.7
      Conserved Domains (1) summary
      pfam05254
      Location:268
      UPF0203; Uncharacterized protein family (UPF0203)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      46928273..46930766 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006249488.5XP_006249550.1  TP53-regulated inhibitor of apoptosis 1 isoform X1

      See identical proteins and their annotated locations for XP_006249550.1

      UniProtKB/TrEMBL
      A6J1U8, D3ZY71
      Conserved Domains (1) summary
      pfam05254
      Location:268
      UPF0203; Uncharacterized protein family (UPF0203)