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    Mylk myosin, light polypeptide kinase [ Mus musculus (house mouse) ]

    Gene ID: 107589, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mylkprovided by MGI
    Official Full Name
    myosin, light polypeptide kinaseprovided by MGI
    Primary source
    MGI:MGI:894806
    See related
    Ensembl:ENSMUSG00000022836 AllianceGenome:MGI:894806
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    KRP; Mlck; nmMlck; smMLCK; MLCK108; MLCK210; 9530072E15Rik; A930019C19Rik
    Summary
    Enables enzyme binding activity. Involved in neurotransmitter receptor transport to postsynaptic membrane and tonic smooth muscle contraction. Acts upstream of or within cellular response to calcium ion; cellular response to potassium ion; and cellular response to xenobiotic stimulus. Located in cell-cell junction. Is expressed in several structures, including central nervous system; genitourinary system; gut; respiratory system; and retina. Human ortholog(s) of this gene implicated in adult respiratory distress syndrome; asthma; coronary artery disease; megacystis-microcolon-intestinal hypoperistalsis syndrome; and thoracic aortic aneurysm. Orthologous to human MYLK (myosin light chain kinase). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in bladder adult (RPKM 454.5), large intestine adult (RPKM 64.4) and 8 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mylk in Genome Data Viewer
    Location:
    16 B3; 16 24.49 cM
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (34565569..34822806)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (34745199..35002436)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_40725 Neighboring gene STARR-positive B cell enhancer ABC_E5539 Neighboring gene ropporin, rhophilin associated protein 1 Neighboring gene predicted gene, 35150 Neighboring gene coiled-coil domain containing 14 Neighboring gene STARR-seq mESC enhancer starr_40726 Neighboring gene RIKEN cDNA 1700119H24 gene Neighboring gene STARR-seq mESC enhancer starr_40727 Neighboring gene RIKEN cDNA E130310I04 gene Neighboring gene predicted gene, 53951 Neighboring gene STARR-seq mESC enhancer starr_40730 Neighboring gene STARR-seq mESC enhancer starr_40731 Neighboring gene STARR-positive B cell enhancer ABC_E1922 Neighboring gene predicted gene, 21691 Neighboring gene predicted gene, 53952 Neighboring gene 3-hydroxyacyl-CoA dehydratase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (6)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables enzyme binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables myosin light chain kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables myosin light chain kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables myosin light chain kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell-cell junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cleavage furrow IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cleavage furrow IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cleavage furrow ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in lamellipodium IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lamellipodium IEA
    Inferred from Electronic Annotation
    more info
     
    located_in lamellipodium ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in stress fiber IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
     
    located_in stress fiber ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    myosin light chain kinase, smooth muscle
    Names
    kinase-related protein
    telokin
    NP_001395190.1
    NP_001395191.1
    NP_001395192.1
    NP_647461.3
    XP_006521765.1
    XP_006521768.1
    XP_017172338.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001408261.1NP_001395190.1  myosin light chain kinase, smooth muscle isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC110166, AC154813
    2. NM_001408262.1NP_001395191.1  myosin light chain kinase, smooth muscle isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC110166, AC154813
    3. NM_001408263.1NP_001395192.1  myosin light chain kinase, smooth muscle isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC110166, AC154813
    4. NM_139300.4NP_647461.3  myosin light chain kinase, smooth muscle isoform 2

      See identical proteins and their annotated locations for NP_647461.3

      Status: VALIDATED

      Source sequence(s)
      AC110166, AC154813, CT010574
      Consensus CDS
      CCDS37320.1
      UniProtKB/Swiss-Prot
      Q3TSJ7, Q6PDN3, Q80UX0, Q80YN7, Q80YN8, Q8K026, Q924D2, Q9ERD3
      UniProtKB/TrEMBL
      B1B1A8
      Related
      ENSMUSP00000023538.9, ENSMUST00000023538.9
      Conserved Domains (8) summary
      cd00096
      Location:637706
      Ig; Immunoglobulin domain
      smart00408
      Location:524587
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:13621453
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:18401930
      I-set; Immunoglobulin I-set domain
      cd14191
      Location:14921750
      STKc_MLCK1; Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1
      pfam00069
      Location:14951750
      Pkinase; Protein kinase domain
      pfam16620
      Location:255409
      23ISL; Unstructured linker between I-set domains 2 and 3 on MYLCK
      cl11960
      Location:12691366
      Ig; Immunoglobulin domain

    RNA

    1. NR_176622.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC110166, AC154813

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      34565569..34822806
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006521702.1XP_006521765.1  myosin light chain kinase, smooth muscle isoform X1

      See identical proteins and their annotated locations for XP_006521765.1

      UniProtKB/Swiss-Prot
      Q3TSJ7, Q6PDN3, Q80UX0, Q80YN7, Q80YN8, Q8K026, Q924D2, Q9ERD3
      Conserved Domains (5) summary
      cd00063
      Location:13531444
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14191
      Location:14831741
      STKc_MLCK1; Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1
      pfam07679
      Location:18311921
      I-set; Immunoglobulin I-set domain
      pfam16620
      Location:246400
      23ISL; Unstructured linker between I-set domains 2 and 3 on MYLCK
      cl11960
      Location:12601357
      Ig; Immunoglobulin domain
    2. XM_017316849.2XP_017172338.1  myosin light chain kinase, smooth muscle isoform X2

      UniProtKB/Swiss-Prot
      Q3TSJ7, Q6PDN3, Q80UX0, Q80YN7, Q80YN8, Q8K026, Q924D2, Q9ERD3
      Conserved Domains (5) summary
      cd00063
      Location:13071398
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd14191
      Location:14371695
      STKc_MLCK1; Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 1
      pfam07679
      Location:17851875
      I-set; Immunoglobulin I-set domain
      pfam16620
      Location:246400
      23ISL; Unstructured linker between I-set domains 2 and 3 on MYLCK
      cl11960
      Location:12141311
      Ig; Immunoglobulin domain
    3. XM_006521705.3XP_006521768.1  myosin light chain kinase, smooth muscle isoform X3

      Conserved Domains (4) summary
      cd05762
      Location:38135
      Ig8_hMLCK_like; Eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK) and similar domains
      cd00063
      Location:131222
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:609699
      I-set; Immunoglobulin I-set domain
      cl21453
      Location:261519
      PKc_like; Protein Kinases, catalytic domain