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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001006664.3 → NP_001006665.1 band 4.1-like protein 1 isoform a
See identical proteins and their annotated locations for NP_001006665.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 3 and 4 all encode isoform a.
- Source sequence(s)
-
AL929153, BF464311, CJ113617
- Consensus CDS
-
CCDS16966.1
- UniProtKB/TrEMBL
- A2AUK5, B6ZHC9
- Related
- ENSMUSP00000029155.9, ENSMUST00000029155.16
- Conserved Domains (7) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam00373
Location:183 → 288
- FERM_M; FERM central domain
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:741 → 866
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 425
- FA; FERM adjacent (FA)
- pfam09379
Location:101 → 164
- FERM_N; FERM N-terminal domain
-
NM_001291120.1 → NP_001278049.1 band 4.1-like protein 1 isoform a
See identical proteins and their annotated locations for NP_001278049.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 3 and 4 all encode isoform a.
- Source sequence(s)
-
AK147611, AL929153, BF464311
- Consensus CDS
-
CCDS16966.1
- UniProtKB/TrEMBL
- A2AUK5, B6ZHC9
- Related
- ENSMUSP00000099426.4, ENSMUST00000103137.10
- Conserved Domains (7) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam00373
Location:183 → 288
- FERM_M; FERM central domain
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:741 → 866
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 425
- FA; FERM adjacent (FA)
- pfam09379
Location:101 → 164
- FERM_N; FERM N-terminal domain
-
NM_001291121.1 → NP_001278050.1 band 4.1-like protein 1 isoform c
See identical proteins and their annotated locations for NP_001278050.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and lacks an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (c) is shorter than isoform a.
- Source sequence(s)
-
AK147611, AL929153, BF464311
- Consensus CDS
-
CCDS71169.1
- UniProtKB/TrEMBL
- A2AUK8, B6ZHC9
- Related
- ENSMUSP00000105205.3, ENSMUST00000109577.9
- Conserved Domains (5) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:482 → 512
- SAB; SAB domain
- pfam05902
Location:730 → 854
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 426
- FA; FERM adjacent (FA)
-
NM_001291122.1 → NP_001278051.1 band 4.1-like protein 1 isoform d
See identical proteins and their annotated locations for NP_001278051.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and lacks two alternate in-frame exons in the central coding region, compared to variant 1. The encoded isoform (d) is shorter than isoform a.
- Source sequence(s)
-
AK147611, AL929153, BF464311
- UniProtKB/TrEMBL
-
B6ZHC9
- Conserved Domains (5) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:482 → 512
- SAB; SAB domain
- pfam05902
Location:594 → 718
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 426
- FA; FERM adjacent (FA)
-
NM_001291123.1 → NP_001278052.1 band 4.1-like protein 1 isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR, and uses an alternate in-frame splice site and lacks two in-frame exons in the central coding region, compared to variant 1. The encoded isoform (e) is shorter than isoform a.
- Source sequence(s)
-
AK147272, AK147611, AL929153, BF464311
- Consensus CDS
-
CCDS71170.1
- UniProtKB/TrEMBL
- A2AUK7, B6ZHC9
- Related
- ENSMUSP00000105202.2, ENSMUST00000109574.8
- Conserved Domains (7) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam00373
Location:183 → 288
- FERM_M; FERM central domain
- pfam04382
Location:481 → 511
- SAB; SAB domain
- pfam05902
Location:592 → 717
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 425
- FA; FERM adjacent (FA)
- pfam09379
Location:101 → 164
- FERM_N; FERM N-terminal domain
-
NM_001368800.1 → NP_001355729.1 band 4.1-like protein 1 isoform f
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) encodes the longest isoform (f).
- Source sequence(s)
-
AL928935, AL929153
- Consensus CDS
-
CCDS89573.1
- UniProtKB/TrEMBL
-
E9PV14
- Related
- ENSMUSP00000121161.4, ENSMUST00000125153.10
- Conserved Domains (5) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:492 → 523
- SAB; SAB domain
- pfam05902
Location:1419 → 1543
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 426
- FA; FERM adjacent (FA)
-
NM_001368801.1 → NP_001355730.1 band 4.1-like protein 1 isoform g
Status: VALIDATED
- Source sequence(s)
-
AL928935, AL929153
- UniProtKB/TrEMBL
-
B6ZHC9
- Conserved Domains (5) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:486 → 516
- SAB; SAB domain
- pfam05902
Location:734 → 858
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 426
- FA; FERM adjacent (FA)
-
NM_001368802.1 → NP_001355731.1 band 4.1-like protein 1 isoform h
Status: VALIDATED
- Source sequence(s)
-
AL929153
- UniProtKB/TrEMBL
-
B6ZHC9
- Conserved Domains (6) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- PRK08691
Location:396 → 598
- PRK08691; DNA polymerase III subunits gamma and tau; Validated
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:493 → 523
- SAB; SAB domain
- pfam05902
Location:741 → 865
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 426
- FA; FERM adjacent (FA)
-
NM_001368803.1 → NP_001355732.1 band 4.1-like protein 1 isoform i
Status: VALIDATED
- Description
- Transcript Variant: This variant (11), as well as variant 12, encodes isoform i.
- Source sequence(s)
-
AL928935, AL929153
- UniProtKB/TrEMBL
-
B6ZHC9
- Conserved Domains (6) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- PRK08691
Location:396 → 599
- PRK08691; DNA polymerase III subunits gamma and tau; Validated
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:494 → 524
- SAB; SAB domain
- pfam05902
Location:756 → 809
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 426
- FA; FERM adjacent (FA)
-
NM_001368804.1 → NP_001355733.1 band 4.1-like protein 1 isoform i
Status: VALIDATED
- Description
- Transcript Variant: This variant (12), as well as variant 11, encodes isoform i.
- Source sequence(s)
-
AL929153
- UniProtKB/TrEMBL
-
B6ZHC9
- Conserved Domains (6) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- PRK08691
Location:396 → 599
- PRK08691; DNA polymerase III subunits gamma and tau; Validated
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:494 → 524
- SAB; SAB domain
- pfam05902
Location:756 → 809
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 426
- FA; FERM adjacent (FA)
-
NM_013510.4 → NP_038538.1 band 4.1-like protein 1 isoform a
See identical proteins and their annotated locations for NP_038538.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform (a). Variants 1, 3 and 4 all encode isoform a.
- Source sequence(s)
-
AK147611, AL929153, BF464311
- Consensus CDS
-
CCDS16966.1
- UniProtKB/TrEMBL
- A2AUK5, B6ZHC9
- Related
- ENSMUSP00000099425.2, ENSMUST00000103136.8
- Conserved Domains (7) summary
-
- smart00295
Location:99 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam00373
Location:183 → 288
- FERM_M; FERM central domain
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:741 → 866
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 425
- FA; FERM adjacent (FA)
- pfam09379
Location:101 → 164
- FERM_N; FERM N-terminal domain
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001003815.2: Suppressed sequence
- Description
- NM_001003815.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.