Fam8a1 family with sequence similarity 8, member A1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Fam8a1provided by RGD
Official Full Name: family with sequence similarity 8, member A1provided by RGD
Primary source: RGD:1307845
See related: EnsemblRapid:ENSRNOG00000026120 AllianceGenome:RGD:1307845
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Rbm24
Summary: Predicted to be part of Hrd1p ubiquitin ligase complex. Orthologous to human FAM8A1 (family with sequence similarity 8 member A1). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Kidney (RPKM 258.4), Brain (RPKM 242.6) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 17p14

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	17	NC_086035.1 (18232834..18241736, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	17	NC_051352.1 (18026601..18035509, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	17	NC_005116.4 (18413093..18421974, complement)

Chromosome 17 - NC_086035.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH141853 (e-PCR)
- UniSTS:223845

RH141116 (e-PCR)
- UniSTS:223112

RH137707 (e-PCR)
- UniSTS:219794

RH131669 (e-PCR)
- UniSTS:214952

D17Rat7 (e-PCR)
- UniSTS:119529

Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
part_of Hrd1p ubiquitin ligase complex	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: protein FAM8A1

Names: RNA binding motif protein 24

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.