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    C1h11orf24 similar to human chromosome 11 open reading frame 24 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 309145, updated on 27-Nov-2024

    Summary

    Official Symbol
    C1h11orf24provided by RGD
    Official Full Name
    similar to human chromosome 11 open reading frame 24provided by RGD
    Primary source
    RGD:1311946
    See related
    AllianceGenome:RGD:1311946
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1311946
    Summary
    Predicted to be located in nucleoplasm. Predicted to be active in Golgi apparatus. Orthologous to human C11orf24 (chromosome 11 open reading frame 24). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Testes (RPKM 70.5), Adrenal (RPKM 38.2) and 9 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See C1h11orf24 in Genome Data Viewer
    Location:
    1q43
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (210374426..210383191)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (200945188..200953953)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (218945565..218954274)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 5 Neighboring gene 40S ribosomal protein S9 pseudogene Neighboring gene uncharacterized LOC134483954 Neighboring gene family with sequence similarity 18, member B, pseudogene 1 Neighboring gene lysine methyltransferase 5B

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    uncharacterized protein C11orf24 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025683.2NP_001020854.1  uncharacterized protein C11orf24 homolog precursor

      See identical proteins and their annotated locations for NP_001020854.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/Swiss-Prot
      Q4V7A5
      UniProtKB/TrEMBL
      A6HYL8
      Conserved Domains (1) summary
      PHA03247
      Location:12367
      PHA03247; large tegument protein UL36; Provisional

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      210374426..210383191
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)