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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001107542.2 → NP_001101012.2 ubiquitin carboxyl-terminal hydrolase 47
Status: VALIDATED
- Source sequence(s)
-
BC166609, CA512624, CB325126, CF109520, CO571839, CV106232, EV771677
- UniProtKB/TrEMBL
- A0A8I6AAW7, F1MAA1
- Related
- ENSRNOP00000058846.1, ENSRNOT00000065712.4
- Conserved Domains (2) summary
-
- cd02659
Location:166 → 546
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam00443
Location:167 → 541
- UCH; Ubiquitin carboxyl-terminal hydrolase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086019.1 Reference GRCr8
- Range
-
175586758..175669904
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_039078096.2 → XP_038934024.1 ubiquitin carboxyl-terminal hydrolase 47 isoform X5
- UniProtKB/TrEMBL
-
A0A8I6AAW7
- Conserved Domains (2) summary
-
- cd02659
Location:50 → 450
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- NF033609
Location:712 → 909
- MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
-
XM_006230044.5 → XP_006230106.1 ubiquitin carboxyl-terminal hydrolase 47 isoform X1
- UniProtKB/TrEMBL
- A0A0G2JUX4, A0A8I6A571
- Related
- ENSRNOP00000088486.2, ENSRNOT00000097971.2
- Conserved Domains (2) summary
-
- cd02659
Location:186 → 586
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam00443
Location:187 → 581
- UCH; Ubiquitin carboxyl-terminal hydrolase
-
XM_006230046.5 → XP_006230108.1 ubiquitin carboxyl-terminal hydrolase 47 isoform X3
- UniProtKB/TrEMBL
-
A0A8I6A571
- Related
- ENSRNOP00000069266.3, ENSRNOT00000087461.3
- Conserved Domains (2) summary
-
- cd02659
Location:186 → 566
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam00443
Location:187 → 561
- UCH; Ubiquitin carboxyl-terminal hydrolase
-
XM_006230045.4 → XP_006230107.1 ubiquitin carboxyl-terminal hydrolase 47 isoform X2
- UniProtKB/TrEMBL
-
A0A8I6AAW7
- Conserved Domains (2) summary
-
- cd02659
Location:166 → 566
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam00443
Location:167 → 561
- UCH; Ubiquitin carboxyl-terminal hydrolase
-
XM_039078090.2 → XP_038934018.1 ubiquitin carboxyl-terminal hydrolase 47 isoform X4
- UniProtKB/TrEMBL
-
A0A8I6AAW7
- Conserved Domains (2) summary
-
- cd02659
Location:98 → 498
- peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- NF033609
Location:760 → 957
- MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA