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    Y47H9A.1 PAW domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173047, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y47H9A.1
    Official Full Name
    PAW domain-containing protein
    Primary source
    WormBase:WBGene00012945
    Locus tag
    CELE_Y47H9A.1
    See related
    AllianceGenome:WB:WBGene00012945
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in glycoprotein catabolic process. Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y47H9A.1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    11
    Sequence:
    Chromosome: I; NC_003279.8 (11623115..11626562)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene PAN-3 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in glycoprotein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PAW domain-containing protein
    NP_492963.1
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      11623115..11626562
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060562.1 → NP_492963.1  PAW domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492963.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EFH6
      Conserved Domains (1) summary
      smart00613
      Location:81 → 165
      PAW; domain present in PNGases and other hypothetical proteins
    Nucleotide Protein
    Heading Accession and Version

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