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    F53C11.4 SH2 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179873, updated on 18-Sep-2024

    Summary

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    Official Symbol
    F53C11.4
    Official Full Name
    SH2 domain-containing protein
    Primary source
    WormBase:WBGene00009974
    Locus tag
    CELE_F53C11.4
    See related
    AllianceGenome:WB:WBGene00009974
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See F53C11.4 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (13784090..13787328, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene TIL domain-containing protein Neighboring gene pseudo Neighboring gene putative oxidoreductase F53C11.3 Neighboring gene USP domain-containing protein;Zf-C3H1 domain-containing protein Neighboring gene Fibronectin type-III domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    SH2 domain-containing protein
    NP_001256545.1
    • Confirmed by transcript evidence
    NP_001256546.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      13784090..13787328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269617.4 → NP_001256546.1  SH2 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256546.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E5QCH3

    2. NM_001269616.5 → NP_001256545.1  SH2 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256545.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q93762
    Nucleotide Protein
    Heading Accession and Version

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