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    • Showing Current items.

    T28F4.5 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 172503, updated on 2-Nov-2024

    Summary

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    Official Symbol
    T28F4.5
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00012140
    Locus tag
    CELE_T28F4.5
    See related
    AllianceGenome:WB:WBGene00012140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ribosome binding activity. Predicted to be involved in several processes, including cellular response to amino acid starvation; negative regulation of autophagy; and ribosome hibernation. Orthologous to human DAP (death associated protein). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See T28F4.5 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003279.8 (7491816..7492934)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Protein-tyrosine phosphatase Neighboring gene Inverted formin-2;PUM-HD domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Bromo domain-containing protein;HMG box domain-containing protein Neighboring gene ncRNA Neighboring gene SH3 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ribosome binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in apoptotic signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cellular response to amino acid starvation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in negative regulation of autophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in ribosome hibernation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_492102.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      7491816..7492934
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059701.8 → NP_492102.1  Uncharacterized protein CELE_T28F4.5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492102.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22850
      Conserved Domains (1) summary
      pfam15228
      Location:12 → 102
      DAP; Death-associated protein
    Nucleotide Protein
    Heading Accession and Version

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