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    • Showing Current items.

    Y50D4C.6 Cysteine dioxygenase [ Caenorhabditis elegans ]

    Gene ID: 178600, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y50D4C.6
    Official Full Name
    Cysteine dioxygenase
    Primary source
    WormBase:WBGene00021750
    Locus tag
    CELE_Y50D4C.6
    See related
    AllianceGenome:WB:WBGene00021750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metal ion binding activity and oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen. Orthologous to human ADO (2-aminoethanethiol dioxygenase). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y50D4C.6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (946723..949860, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Survival of motor neuron-related-splicing factor 30;Tudor domain-containing protein Neighboring gene Xylosyltransferase sqv-6;protein xylosyltransferase Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Cysteine dioxygenase
    NP_741508.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      946723..949860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171435.6 → NP_741508.2  Cysteine dioxygenase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741508.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IAA1
      Conserved Domains (1) summary
      pfam07847
      Location:66 → 225
      DUF1637; Protein of unknown function (DUF1637)

    RNA

    1. NR_132493.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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