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    Y51F10.4 Aa_trans domain-containing protein;Amino acid transporter transmembrane domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 245996, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y51F10.4
    Official Full Name
    Aa_trans domain-containing protein;Amino acid transporter transmembrane domain-containing protein
    Primary source
    WormBase:WBGene00021765
    Locus tag
    CELE_Y51F10.4
    See related
    AllianceGenome:WB:WBGene00021765
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to be active in membrane. Orthologous to human SLC38A10 (solute carrier family 38 member 10). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y51F10.4 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (1932346..1945220)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Trafficking protein particle complex subunit 10 Neighboring gene ncRNA Neighboring gene beta-N-acetylhexosaminidase Neighboring gene EGF-like domain-containing protein Neighboring gene UBA domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables L-amino acid transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in L-alpha-amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in amino acid transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Aa_trans domain-containing protein;Amino acid transporter transmembrane domain-containing protein
    NP_001032988.1
    • Confirmed by transcript evidence
    NP_001032989.1
    • Confirmed by transcript evidence
    NP_001293396.1
    • Confirmed by transcript evidence
    NP_001293397.1
    • Confirmed by transcript evidence
    NP_001364830.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      1932346..1945220
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001037900.4 → NP_001032989.1  Amino acid transporter transmembrane domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001032989.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B5D5N6
      Conserved Domains (1) summary
      cl00456
      Location:50 → 235
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. NM_001037899.6 → NP_001032988.1  Amino acid transporter transmembrane domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001032988.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8WTK1
      Conserved Domains (1) summary
      cl00456
      Location:50 → 454
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. NM_001377688.2 → NP_001364830.1  Amino acid transporter transmembrane domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      X5MD71
      Conserved Domains (1) summary
      cl00456
      Location:25 → 244
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    4. NM_001306467.3 → NP_001293396.1  Aa_trans domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293396.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X5MK26

    5. NM_001306468.3 → NP_001293397.1  Aa_trans domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293397.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X5ML92
    Nucleotide Protein
    Heading Accession and Version

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