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    C50B6.3 DUF3452 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179811, updated on 18-Sep-2024

    Summary

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    Official Symbol
    C50B6.3
    Official Full Name
    DUF3452 domain-containing protein
    Primary source
    WormBase:WBGene00008219
    Locus tag
    CELE_C50B6.3
    See related
    AllianceGenome:WB:WBGene00008219
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See C50B6.3 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (13313573..13315821)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DUF4817 domain-containing protein Neighboring gene Tetratricopeptide SHNi-TPR domain-containing protein Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene Serpentine Receptor, class H

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Duchaine TF, et al. Cell, 2006 Jan 27. PMID 16439208
    2. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    DUF3452 domain-containing protein
    NP_001256498.1
    • Confirmed by transcript evidence
    NP_001256499.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      13313573..13315821
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269570.2 → NP_001256499.1  DUF3452 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256499.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17689
      Conserved Domains (1) summary
      PRK09537
      Location:366 → 452
      pylS; pyrrolysine--tRNA(Pyl) ligase

    2. NM_001269569.2 → NP_001256498.1  DUF3452 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256498.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2L2E3
      Conserved Domains (1) summary
      PRK09537
      Location:368 → 454
      pylS; pyrolysyl-tRNA synthetase; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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