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    lido-13 LIn-8 Domain containing [ Caenorhabditis elegans ]

    Gene ID: 173651, updated on 9-Dec-2024

    Summary

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    Official Symbol
    lido-13
    Official Full Name
    LIn-8 Domain containing
    Primary source
    WormBase:WBGene00015200
    Locus tag
    CELE_B0454.9
    See related
    AllianceGenome:WB:WBGene00015200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See lido-13 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (3052627..3054321, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class H Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class I Neighboring gene Protein lin-8 Neighboring gene Protein aurora borealis

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multiple ERK substrates execute single biological processes in Caenorhabditis elegans germ-line development. Arur S, et al. Proc Natl Acad Sci U S A, 2009 Mar 24. PMID 19264959, Free PMC Article
    2. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    LIn-8 Domain containing
    NP_494435.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class lido

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      3052627..3054321 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062034.8 → NP_494435.1  LIn-8 Domain containing [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494435.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17173
      Conserved Domains (1) summary
      pfam03353
      Location:30 → 345
      Lin-8; Ras-mediated vulval-induction antagonizt
    Nucleotide Protein
    Heading Accession and Version

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