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    ule-1 Chitin-binding type-2 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171778, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ule-1
    Official Full Name
    Chitin-binding type-2 domain-containing protein
    Primary source
    WormBase:WBGene00021005
    Locus tag
    CELE_W03F11.1
    See related
    AllianceGenome:WB:WBGene00021005
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ule-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (2219468..2222313, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Rx N-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene Afadin;FHA domain-containing protein;PDZ domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Receptor-type guanylate cyclase gcy-17 Neighboring gene Major sperm protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A C. elegans Myc-like network cooperates with semaphorin and Wnt signaling pathways to control cell migration. Pickett CL, et al. Dev Biol, 2007 Oct 15. PMID 17826759, Free PMC Article
    2. The CHARGE syndrome ortholog CHD-7 regulates TGF-β pathways in Caenorhabditis elegans. Jofré DM, et al. Proc Natl Acad Sci U S A, 2022 Apr 12. PMID 35394881, Free PMC Article
    3. Galectin LEC-1 plays a defensive role against damage due to oxidative stress in Caenorhabditis elegans. Takeuchi T, et al. J Biochem, 2013 Nov. PMID 23935187
    4. Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules. Marnik EA, et al. Genetics, 2019 Nov. PMID 31506335, Free PMC Article
    5. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Chitin-binding type-2 domain-containing protein
    NP_001293326.1
    • Confirmed by transcript evidence
    NP_490942.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      2219468..2222313 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058541.7 → NP_490942.1  Chitin-binding type-2 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_490942.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O01780
      Conserved Domains (1) summary
      smart00494
      Location:159 → 204
      ChtBD2; Chitin-binding domain type 2

    2. NM_001306397.3 → NP_001293326.1  Chitin-binding type-2 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293326.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X5M5P2
      Conserved Domains (1) summary
      smart00494
      Location:58 → 103
      ChtBD2; Chitin-binding domain type 2
    Nucleotide Protein
    Heading Accession and Version

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