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    Ighv3-6 immunoglobulin heavy variable 3-6 [ Mus musculus (house mouse) ]

    Gene ID: 780829, updated on 2-Nov-2024

    Summary

    Official Symbol
    Ighv3-6provided by MGI
    Official Full Name
    immunoglobulin heavy variable 3-6provided by MGI
    Primary source
    MGI:MGI:4439856
    See related
    IMGT/GENE-DB:IGHV3-6; AllianceGenome:MGI:4439856
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm16932
    Summary
    Predicted to enable antigen binding activity. Predicted to be involved in immunoglobulin mediated immune response. Predicted to be located in extracellular region and plasma membrane. Predicted to be part of immunoglobulin complex. Orthologous to several human genes including IGHV4-28 (immunoglobulin heavy variable 4-28); IGHV4-30-4 (immunoglobulin heavy variable 4-30-4); and IGHV4-31 (immunoglobulin heavy variable 4-31). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See Ighv3-6 in Genome Data Viewer
    Location:
    12 F1; 12 62.34 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (114251772..114252067, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (114288152..114288447, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene immunoglobulin heavy chain complex Neighboring gene STARR-seq mESC enhancer starr_33392 Neighboring gene STARR-seq mESC enhancer starr_33393 Neighboring gene immunoglobulin heavy variable 13-1 Neighboring gene RAD23b homolog pseudogene Neighboring gene immunoglobulin heavy variable 9-4 Neighboring gene immunoglobulin heavy variable V3-7

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Other Names

    • Ig heavy chain V region MOPC 315
    • VH gene product
    • immunoglobulin heavy variable V3-6

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables antigen binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in immunoglobulin mediated immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region TAS
    Traceable Author Statement
    more info
     
    part_of immunoglobulin complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_005838.1 

      Range
      1040556..1040851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      114251772..114252067 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)