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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086019.1 Reference GRCr8
- Range
-
138722445..139029401
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_039105531.2 → XP_038961459.1 A-kinase anchor protein 13 isoform X1
- UniProtKB/TrEMBL
- A0A8I5Y2J4, A0A8L2Q7A1
- Related
- ENSRNOP00000014802.7, ENSRNOT00000014802.8
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1975 → 2169
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2509 → 2669
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2212 → 2314
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1769 → 1824
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105543.2 → XP_038961471.1 A-kinase anchor protein 13 isoform X3
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1975 → 2169
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2508 → 2668
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2212 → 2314
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1769 → 1824
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105541.2 → XP_038961469.1 A-kinase anchor protein 13 isoform X2
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1974 → 2168
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2508 → 2668
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2211 → 2313
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1769 → 1824
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_063284528.1 → XP_063140598.1 A-kinase anchor protein 13 isoform X6
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
-
XM_039105548.2 → XP_038961476.1 A-kinase anchor protein 13 isoform X5
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1973 → 2167
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2507 → 2667
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2210 → 2312
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1769 → 1824
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105547.2 → XP_038961475.1 A-kinase anchor protein 13 isoform X4
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1974 → 2168
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2508 → 2668
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2211 → 2313
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1769 → 1824
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_063284529.1 → XP_063140599.1 A-kinase anchor protein 13 isoform X7
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
-
XM_039105554.2 → XP_038961482.1 A-kinase anchor protein 13 isoform X9
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
- Related
- ENSRNOP00000078206.1, ENSRNOT00000095963.2
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1953 → 2147
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2487 → 2647
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2190 → 2292
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1747 → 1802
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105549.2 → XP_038961477.1 A-kinase anchor protein 13 isoform X8
- UniProtKB/TrEMBL
- A0A8I5Y2J4, A0A8I6AJL6
- Related
- ENSRNOP00000088819.1, ENSRNOT00000101691.2
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1957 → 2151
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2491 → 2651
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2194 → 2296
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1751 → 1806
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105560.2 → XP_038961488.1 A-kinase anchor protein 13 isoform X10
- UniProtKB/TrEMBL
- A0A8I5XVJ8, A0A8I5Y2J4
- Related
- ENSRNOP00000076907.1, ENSRNOT00000108771.2
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1935 → 2129
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2469 → 2629
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2172 → 2274
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1729 → 1784
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105567.2 → XP_038961495.1 A-kinase anchor protein 13 isoform X11
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1933 → 2127
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2467 → 2627
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2170 → 2272
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1729 → 1784
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105573.2 → XP_038961501.1 A-kinase anchor protein 13 isoform X1
- UniProtKB/TrEMBL
- A0A8I5Y2J4, A0A8L2Q7A1
- Related
- ENSRNOP00000105310.1, ENSRNOT00000132269.1
- Conserved Domains (5) summary
-
- PHA03307
Location:545 → 837
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1975 → 2169
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2509 → 2669
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2212 → 2314
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1769 → 1824
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105585.2 → XP_038961513.1 A-kinase anchor protein 13 isoform X13
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
- Conserved Domains (5) summary
-
- PHA03307
Location:268 → 560
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1698 → 1892
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2232 → 2392
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:1935 → 2037
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1492 → 1547
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105578.2 → XP_038961506.1 A-kinase anchor protein 13 isoform X12
- UniProtKB/TrEMBL
-
A0A8I5Y2J4
- Conserved Domains (5) summary
-
- PHA03307
Location:337 → 629
- PHA03307; transcriptional regulator ICP4; Provisional
- cd00160
Location:1767 → 1961
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- TIGR02168
Location:2301 → 2461
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd13392
Location:2004 → 2106
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- cd20878
Location:1561 → 1616
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105587.2 → XP_038961515.1 A-kinase anchor protein 13 isoform X14
- Conserved Domains (4) summary
-
- cd00160
Location:669 → 863
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13392
Location:906 → 1008
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- pfam17380
Location:1216 → 1359
- DUF5401; Family of unknown function (DUF5401)
- cd20878
Location:463 → 518
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_063284555.1 → XP_063140625.1 A-kinase anchor protein 13 isoform X17
-
XM_063284552.1 → XP_063140622.1 A-kinase anchor protein 13 isoform X16
-
XM_063284561.1 → XP_063140631.1 A-kinase anchor protein 13 isoform X20
-
XM_039105588.2 → XP_038961516.1 A-kinase anchor protein 13 isoform X15
- Conserved Domains (4) summary
-
- cd00160
Location:654 → 848
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13392
Location:891 → 993
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- pfam17380
Location:1201 → 1344
- DUF5401; Family of unknown function (DUF5401)
- cd20878
Location:448 → 503
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_039105591.2 → XP_038961519.1 A-kinase anchor protein 13 isoform X19
- Conserved Domains (4) summary
-
- cd00160
Location:613 → 807
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13392
Location:850 → 952
- PH_AKAP13; A-kinase anchoring protein 13 Pleckstrin homology (PH) domain
- pfam17380
Location:1160 → 1303
- DUF5401; Family of unknown function (DUF5401)
- cd20878
Location:408 → 463
- C1_AKAP13; protein kinase C conserved region 1 (C1 domain) found in A-kinase anchor protein 13 (AKAP-13) and similar proteins
-
XM_063284557.1 → XP_063140627.1 A-kinase anchor protein 13 isoform X18
-
XM_063284569.1 → XP_063140639.1 A-kinase anchor protein 13 isoform X21
-
XM_063284572.1 → XP_063140642.1 A-kinase anchor protein 13 isoform X22