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    ytkC putative autolytic amidase [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 937209, updated on 12-Feb-2021

    Summary

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    Gene symbol
    ytkC
    Gene description
    putative autolytic amidase
    Locus tag
    BSU_30640
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU30640
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    Genomic context

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    Sequence:
    NC_000964.3 (3135668..3136072, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative ABC anion transporter component, ATP-binding Neighboring gene putative permease of ABC anion transporter Neighboring gene nucleoside and RNA triphosphate phosphohydrolase Neighboring gene DNA-protecting protein, mini-ferritin Neighboring gene hypothetical protein Neighboring gene putative lipoprotein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative autolytic amidase
    NP_390942.1
    • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15849754, 16850406; Product type h: extrachromosomal origin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      3135668..3136072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_390942.1 putative autolytic amidase [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_390942.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      COG4824
      Location:3 → 134
      COG4824; Phage-related holin (Lysis protein) [Mobilome: prophages, transposons]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O34883.1

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases