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    Tspyl3 TSPY-like 3 [ Mus musculus (house mouse) ]

    Gene ID: 241732, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tspyl3provided by MGI
    Official Full Name
    TSPY-like 3provided by MGI
    Primary source
    MGI:MGI:2139328
    See related
    Ensembl:ENSMUSG00000074671 AllianceGenome:MGI:2139328
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm36
    Summary
    Predicted to enable chromatin binding activity and histone binding activity. Predicted to be located in chromatin. Predicted to be active in nucleus. Orthologous to human TSPY26P (testis specific protein Y-linked 26, pseudogene). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Tspyl3 in Genome Data Viewer
    Location:
    2 H1; 2 75.41 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (153064290..153067361, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (153222370..153225441, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene hemopoietic cell kinase Neighboring gene STARR-positive B cell enhancer ABC_E1605 Neighboring gene STARR-seq mESC enhancer starr_06087 Neighboring gene STARR-seq mESC enhancer starr_06088 Neighboring gene transmembrane 9 superfamily member 4 Neighboring gene protein transport protein Sec61 subunit gamma pseudogene Neighboring gene pleiomorphic adenoma gene-like 2 Neighboring gene protein O-fucosyltransferase 1 Neighboring gene STARR-positive B cell enhancer ABC_E7868 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:153088886-153089039

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC58351

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in chromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198617.2NP_941019.2  TSPY-like 3

      See identical proteins and their annotated locations for NP_941019.2

      Status: VALIDATED

      Source sequence(s)
      AK148882, BY243312, CJ313147
      Consensus CDS
      CCDS16907.2
      UniProtKB/TrEMBL
      Q3TIT2, Q3UYP3
      Related
      ENSMUSP00000096799.3, ENSMUST00000099194.4
      Conserved Domains (1) summary
      cl08298
      Location:174305
      NAP; Nucleosome assembly protein (NAP)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      153064290..153067361 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)