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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001130184.1 → NP_001123656.1 protein Jade-1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. All four variants encode the same protein.
- Source sequence(s)
-
AV515494, BN000281, BY060282
- Consensus CDS
-
CCDS17331.1
- UniProtKB/Swiss-Prot
- Q6IE84, Q6ZPI0, Q8C7S6, Q8CFM2, Q8R362
- Related
- ENSMUSP00000026865.9, ENSMUST00000026865.15
- Conserved Domains (2) summary
-
- COG5141
Location:100 → 528
- COG5141; PHD zinc finger-containing protein [General function prediction only]
- cd15671
Location:259 → 369
- ePHD_JADE; Extended PHD finger found in protein Jade-1, Jade-2, Jade-3 and similar proteins
-
NM_001130185.1 → NP_001123657.1 protein Jade-1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. All four variants encode the same protein.
- Source sequence(s)
-
AV515494, BN000281, BY146568
- Consensus CDS
-
CCDS17331.1
- UniProtKB/Swiss-Prot
- Q6IE84, Q6ZPI0, Q8C7S6, Q8CFM2, Q8R362
- Related
- ENSMUSP00000127113.2, ENSMUST00000170711.8
- Conserved Domains (2) summary
-
- COG5141
Location:100 → 528
- COG5141; PHD zinc finger-containing protein [General function prediction only]
- cd15671
Location:259 → 369
- ePHD_JADE; Extended PHD finger found in protein Jade-1, Jade-2, Jade-3 and similar proteins
-
NM_001130186.1 → NP_001123658.1 protein Jade-1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. All four variants encode the same protein.
- Source sequence(s)
-
AV515494, BN000281, CD563805
- Consensus CDS
-
CCDS17331.1
- UniProtKB/Swiss-Prot
- Q6IE84, Q6ZPI0, Q8C7S6, Q8CFM2, Q8R362
- Related
- ENSMUSP00000131441.2, ENSMUST00000168086.7
- Conserved Domains (2) summary
-
- COG5141
Location:100 → 528
- COG5141; PHD zinc finger-containing protein [General function prediction only]
- cd15671
Location:259 → 369
- ePHD_JADE; Extended PHD finger found in protein Jade-1, Jade-2, Jade-3 and similar proteins
-
NM_172303.4 → NP_758507.3 protein Jade-1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. All four variants encode the same protein.
- Source sequence(s)
-
AV515494, BN000281, CJ060622
- Consensus CDS
-
CCDS17331.1
- UniProtKB/Swiss-Prot
- Q6IE84, Q6ZPI0, Q8C7S6, Q8CFM2, Q8R362
- Related
- ENSMUSP00000128152.2, ENSMUST00000163764.8
- Conserved Domains (2) summary
-
- COG5141
Location:100 → 528
- COG5141; PHD zinc finger-containing protein [General function prediction only]
- cd15671
Location:259 → 369
- ePHD_JADE; Extended PHD finger found in protein Jade-1, Jade-2, Jade-3 and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000069.7 Reference GRCm39 C57BL/6J
- Range
-
41510169..41571299
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030252630.1 → XP_030108490.1 protein Jade-1 isoform X1
- UniProtKB/Swiss-Prot
- Q6IE84, Q6ZPI0, Q8C7S6, Q8CFM2, Q8R362
- Conserved Domains (2) summary
-
- COG5141
Location:100 → 528
- COG5141; PHD zinc finger-containing protein [General function prediction only]
- cd15671
Location:259 → 369
- ePHD_JADE; Extended PHD finger found in protein Jade-1, Jade-2, Jade-3 and similar proteins
-
XM_030252631.2 → XP_030108491.1 protein Jade-1 isoform X1
- UniProtKB/Swiss-Prot
- Q6IE84, Q6ZPI0, Q8C7S6, Q8CFM2, Q8R362
- Conserved Domains (2) summary
-
- COG5141
Location:100 → 528
- COG5141; PHD zinc finger-containing protein [General function prediction only]
- cd15671
Location:259 → 369
- ePHD_JADE; Extended PHD finger found in protein Jade-1, Jade-2, Jade-3 and similar proteins
-
XM_006500784.4 → XP_006500847.1 protein Jade-1 isoform X2
- Conserved Domains (2) summary
-
- COG5141
Location:115 → 543
- COG5141; PHD zinc finger-containing protein [General function prediction only]
- cd15671
Location:274 → 384
- ePHD_JADE; Extended PHD finger found in protein Jade-1, Jade-2, Jade-3 and similar proteins