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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 1466531, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000028650
    Locus tag
    YHR212W-A
    See related
    AllianceGenome:SGD:S000028650; FungiDB:YHR212W-A; VEuPathDB:YHR212W-A
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (538742..538945)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene aldose 1-epimerase superfamily protein Neighboring gene flocculin FLO5 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An integrated approach for finding overlooked genes in yeast. Kumar A, et al. Nat Biotechnol, 2002 Jan. PMID 11753363
    2. Variation in gene duplicates with low synonymous divergence in Saccharomyces cerevisiae relative to Caenorhabditis elegans. Katju V, et al. Genome Biol, 2009. PMID 19594930, Free PMC Article
    3. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Johnston M, et al. Science, 1994 Sep 30. PMID 8091229
    4. Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs. Mount HO, et al. PLoS Genet, 2018 Apr. PMID 29702647, Free PMC Article
    5. One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Yofe I, et al. Nat Methods, 2016 Apr. PMID 26928762, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_878091.3
    • Pseudogenic fragment with similarity to flocculins; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YHR212W-A has a paralog, YAR061W, that arose from a segmental duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      538742..538945
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184598.3 → NP_878091.3  TPA: uncharacterized protein YHR212W-A [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_878091.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DLG1, P0CX90, P0CX91, P39561, Q547K8
      UniProtKB/TrEMBL
      B3LUS1, C7GTT7, C8Z3N5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CX90.1
    P0CX91.1

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