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    Basic-leucine zipper (bZIP) transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830045, updated on 18-Sep-2024

    Summary

    Official Full Name
    Basic-leucine zipper (bZIP) transcription factor family protein
    Primary source
    TAIR:AT4G38900
    Locus tag
    AT4G38900
    See related
    Araport:AT4G38900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    basic leucine-zipper 29; bZIP29; F19H22.5
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (18139237..18142071, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene GLN phosphoribosyl pyrophosphate amidotransferase 3 Neighboring gene FMN-linked oxidoreductases superfamily protein Neighboring gene uncharacterized protein Neighboring gene basic pentacysteine 5 Neighboring gene vacuolar-type H[+]-ATPase C3

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_003075.7

    Interactions

    General gene information

    NM_001036733.4
    NM_120050.4
    NM_179189.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in cytoplasm PubMed 
    located_in cytosol PubMed 
    located_in nucleus PubMed 
    located_in nucleus  

    General protein information

    Preferred Names
    Basic-leucine zipper (bZIP) transcription factor family protein
    NP_001031810.1
    • Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink).
    NP_195601.1
    • Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 2903 Blast hits to 2067 proteins in 270 species: Archae - 2; Bacteria - 286; Metazoa - 482; Fungi - 174; Plants - 835; Viruses - 0; Other Eukaryotes - 1124 (source: NCBI BLink).
    NP_849520.1
    • Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G21230.1); Has 3605 Blast hits to 2736 proteins in 325 species: Archae - 8; Bacteria - 323; Metazoa - 540; Fungi - 250; Plants - 1223; Viruses - 1; Other Eukaryotes - 1260 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      18139237..18142071 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036733.4 → NP_001031810.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031810.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H1F0, Q8RXK4, Q9T0J7
      UniProtKB/TrEMBL
      A0A178UWI2, A0A5S9Y093
      Conserved Domains (2) summary
      smart00935
      Location:378 → 491
      OmpH; Outer membrane protein (OmpH-like)
      cd14703
      Location:397 → 446
      bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
    2. NM_179189.4 → NP_849520.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849520.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H1F0, Q8RXK4, Q9T0J7
      UniProtKB/TrEMBL
      A0A178UWI2, A0A5S9Y093
      Conserved Domains (2) summary
      smart00935
      Location:378 → 491
      OmpH; Outer membrane protein (OmpH-like)
      cd14703
      Location:397 → 446
      bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
    3. NM_120050.4 → NP_195601.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195601.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y093
      Conserved Domains (2) summary
      cd14703
      Location:406 → 452
      bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
      cl23720
      Location:404 → 510
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
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