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    CG5902 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42839, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5902provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039136
    Locus tag
    Dmel_CG5902
    See related
    AllianceGenome:FB:FBgn0039136
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.372; Dmel\CG5902
    Summary
    Is expressed in organism. Human ortholog(s) of this gene implicated in midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis. Orthologous to human AMMECR1 (AMMECR nuclear protein 1) and AMMECR1L (AMMECR1 like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5902 in Genome Data Viewer
    Location:
    95D4-95D5; 3-82 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23986642..23988738)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19812364..19814460)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene mimi Neighboring gene mir-9381 stem loop Neighboring gene uncharacterized protein Neighboring gene Ecdysteroid phosphate phosphatase Neighboring gene Rab7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Systematic screening of a Drosophila ORF library in vivo uncovers Wnt/Wg pathway components. Schertel C, et al. Dev Cell, 2013 Apr 29. PMID 23583758
    2. Tissue-specific (ts)CRISPR as an efficient strategy for in vivo screening in Drosophila. Meltzer H, et al. Nat Commun, 2019 May 8. PMID 31068592, Free PMC Article
    3. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
    4. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
    5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5902-PA
    CG5902-PB
    CG5902-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      23986642..23988738
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142944.4 → NP_651201.1  uncharacterized protein Dmel_CG5902, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651201.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V3B3, Q9VCF0
      UniProtKB/TrEMBL
      E1JIV0
      Related
      FBpp0083890
      Conserved Domains (1) summary
      pfam01871
      Location:50 → 219
      AMMECR1; AMMECR1

    2. NM_001170234.2 → NP_001163705.1  uncharacterized protein Dmel_CG5902, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163705.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V3B3, Q9VCF0
      UniProtKB/TrEMBL
      E1JIV0
      Conserved Domains (1) summary
      pfam01871
      Location:50 → 219
      AMMECR1; AMMECR1

    3. NM_170106.4 → NP_732929.1  uncharacterized protein Dmel_CG5902, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732929.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V3B3, Q9VCF0
      UniProtKB/TrEMBL
      E1JIV0
      Related
      FBpp0083889
      Conserved Domains (1) summary
      pfam01871
      Location:50 → 219
      AMMECR1; AMMECR1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1JIV0 E1JIV0
    Q9VCF0.1 Q9VCF0

    Gene LinkOut

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