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    CG10209 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36652, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG10209provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033971
    Locus tag
    Dmel_CG10209
    See related
    AllianceGenome:FB:FBgn0033971
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10209
    Summary
    Predicted to enable DNA binding activity. Predicted to be active in nucleus. Is expressed in embryonic midgut chamber and organism. Orthologous to human NAIF1 (nuclear apoptosis inducing factor 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG10209 in Genome Data Viewer
    Location:
    51C5-51C5; 2-72 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (14846064..14848366, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (10733569..10735871, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Na[+]-dependent inorganic phosphate cotransporter Neighboring gene Structural maintenance of chromosomes 2 Neighboring gene Ercc1 Neighboring gene Ciao1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cytoplasmic polyadenylation is a major mRNA regulator during oogenesis and egg activation in Drosophila. Cui J, et al. Dev Biol, 2013 Nov 1. PMID 23978535, Free PMC Article
    2. Misexpression screen delineates novel genes controlling Drosophila lifespan. Paik D, et al. Mech Ageing Dev, 2012 May. PMID 22366109, Free PMC Article
    3. A modERN resource: identification of Drosophila transcription factor candidate target genes using RNAi. Fisher WW, et al. Genetics, 2023 Apr 6. PMID 36652461, Free PMC Article
    4. Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live Drosophila. Bischof J, et al. Elife, 2018 Sep 24. PMID 30247122, Free PMC Article
    5. A Comprehensive Drosophila melanogaster Transcription Factor Interactome. Shokri L, et al. Cell Rep, 2019 Apr 16. PMID 30995488, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG10209-PA
    CG10209-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      14846064..14848366 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137150.4 → NP_610994.1  uncharacterized protein Dmel_CG10209, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610994.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K3Q3
      Related
      FBpp0086592
      Conserved Domains (2) summary
      pfam02944
      Location:261 → 295
      BESS; BESS motif
      cl23759
      Location:3 → 65
      GT1; GT1, myb-like, SANT family

    2. NM_001274053.2 → NP_001260982.1  uncharacterized protein Dmel_CG10209, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260982.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KEQ7
      Conserved Domains (2) summary
      pfam02944
      Location:261 → 295
      BESS; BESS motif
      cl23759
      Location:3 → 65
      GT1; GT1, myb-like, SANT family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KEQ7 A0A0B4KEQ7
    Q7K3Q3 Q7K3Q3

    Gene LinkOut

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