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    amos absent MD neurons and olfactory sensilla [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35110, updated on 9-Dec-2024

    Summary

    Official Symbol
    amosprovided by FlyBase
    Official Full Name
    absent MD neurons and olfactory sensillaprovided by FlyBase
    Primary source
    FLYBASE:FBgn0003270
    Locus tag
    Dmel_CG10393
    See related
    AllianceGenome:FB:FBgn0003270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Amos; asolo; bHLHa10; CG10393; Dmel\CG10393; Roi; rolo; Tft
    Summary
    Enables protein heterodimerization activity. Contributes to RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in dendrite morphogenesis and sensory organ precursor cell fate determination. Predicted to be active in nucleus. Is expressed in several structures, including adult antennal olfactory receptor neurons; antennal disc; female germline cell; segment; and sensory nervous system primordium. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness and persistent hyperplastic primary vitreous. Orthologous to several human genes including ATOH1 (atonal bHLH transcription factor 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See amos in Genome Data Viewer
    Location:
    36F6-36F6; 2-53 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (18596136..18596921, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (18596136..18596921, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Phosphodiesterase 11 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables E-box binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    contributes_to RNA polymerase II transcription regulatory region sequence-specific DNA binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein heterodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in axon development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in dendrite morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neuron fate commitment IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sensory organ boundary specification IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sensory organ development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sensory organ development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sensory organ precursor cell fate determination IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in sensory organ precursor cell fate determination IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    absent MD neurons and olfactory sensilla
    Names
    CG10393-PA
    Rough-eye
    absent MD neurons
    amos
    amos-PA
    rough eye
    tufted

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      18596136..18596921 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058098.3NP_477446.1  absent MD neurons and olfactory sensilla [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_477446.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0IGQ5, Q9VJ76, Q9Y0A7
      Related
      FBpp0080631
      Conserved Domains (1) summary
      cd00083
      Location:137195
      HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...