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    CG11617 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33183, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG11617provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031232
    Locus tag
    Dmel_CG11617
    See related
    AllianceGenome:FB:FBgn0031232
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11617; Mkx
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell development; muscle organ development; and regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in larval muscle system; larval somatic muscle cell; wing hinge primordium; and wing pouch. Orthologous to human MKX (mohawk homeobox). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See CG11617 in Genome Data Viewer
    Location:
    21B4-21B4; 2-0.5 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (204743..207297, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (204743..207297, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene split ends Neighboring gene TBC1 domain family member 15/17 Neighboring gene mitochondrial ribosomal protein L10 Neighboring gene long non-coding RNA:CR44220 Neighboring gene long non-coding RNA:CR44222 Neighboring gene kismet

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in cell development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in muscle organ development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG11617-PA
    CG11617-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      204743..207297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134658.3NP_608502.1  uncharacterized protein Dmel_CG11617, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608502.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPL4
      Related
      FBpp0077805
      Conserved Domains (1) summary
      pfam05920
      Location:4684
      Homeobox_KN; Homeobox KN domain
    2. NM_001258888.2NP_001245817.1  uncharacterized protein Dmel_CG11617, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245817.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPL4
      Conserved Domains (1) summary
      pfam05920
      Location:4684
      Homeobox_KN; Homeobox KN domain