U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    lectin-33A lectin-33A [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 53516, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    lectin-33Aprovided by FlyBase
    Official Full Name
    lectin-33Aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040096
    Locus tag
    Dmel_CG16834
    See related
    AllianceGenome:FB:FBgn0040096
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    AC 007083A; AC007083a; CG16834; Dmel\CG16834; lecti-33A; lectin-33a
    Summary
    Predicted to enable galactose binding activity. Human ortholog(s) of this gene implicated in extrapulmonary tuberculosis; pulmonary tuberculosis; and severe acute respiratory syndrome. Orthologous to several human genes including CLEC4A (C-type lectin domain family 4 member A); CLEC4C (C-type lectin domain family 4 member C); and CLEC4M (C-type lectin domain family 4 member M). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See lectin-33A in Genome Data Viewer
    Location:
    32C1-32C1; 2-44 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (11002072..11002738)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (11002072..11002738)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Tubulin tyrosine ligase-like 4A Neighboring gene aubergine Neighboring gene Ribosomal protein L9 Neighboring gene Nucleoporin 154kD Neighboring gene Arginine methyltransferase 8

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Whole-genome expression plasticity across tropical and temperate Drosophila melanogaster populations from Eastern Australia. Levine MT, et al. Mol Biol Evol, 2011 Jan. PMID 20671040, Free PMC Article
    2. A rapid genome-wide response to Drosophila melanogaster social interactions. Carney GE. BMC Genomics, 2007 Aug 22. PMID 17714588, Free PMC Article
    3. Insect glycobiology: a lectin multigene family in Drosophila melanogaster. Theopold U, et al. Biochem Biophys Res Commun, 1999 Aug 11. PMID 10441526
    4. Comparative genomic analysis of C-type lectin-domain genes in seven holometabolous insect species. Lu Y, et al. Insect Biochem Mol Biol, 2020 Nov. PMID 32841718
    5. Participation of a galactose-specific C-type lectin in Drosophila immunity. Tanji T, et al. Biochem J, 2006 May 15. PMID 16475980, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables carbohydrate binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables galactose binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    lectin-33A
    Names
    CG16834-PB
    lectin-33A-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      11002072..11002738
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001103675.2 → NP_001097145.1  lectin-33A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097145.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VKL8
      Conserved Domains (1) summary
      smart00034
      Location:24 → 157
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VKL8 Q9VKL8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools