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    Or42b Odorant receptor 42b [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35516, updated on 9-Dec-2024

    Summary

    Official Symbol
    Or42bprovided by FlyBase
    Official Full Name
    Odorant receptor 42bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033043
    Locus tag
    Dmel_CG12754
    See related
    AllianceGenome:FB:FBgn0033043
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    41E.1; 42b; CG12754; Dmel\CG12754; DOR118; Or42; OR42b
    Summary
    Enables olfactory receptor activity. Involved in sensory perception of smell. Predicted to be located in dendrite membrane. Predicted to be part of cation channel complex. Predicted to be active in plasma membrane. Is expressed in adult olfactory receptor neuron Or42b; antennal basiconic sensillum ab1; antennal lobe glomerulus DM1; larval antennal lobe glomerulus 42b; and larval olfactory receptor neuron Or42b. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Or42b in Genome Data Viewer
    Location:
    41F11-41F11; 2-55 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (5797195..5798512, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (1684700..1686017, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Odorant receptor 42a Neighboring gene Tetraspanin 42A Neighboring gene defective proboscis extension response 12 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ionotropic olfactory receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables olfactory receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in detection of chemical stimulus involved in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in detection of chemical stimulus involved in sensory perception of smell ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of smell IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of cation channel complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in dendrite membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    odorant receptor 42b
    Names
    CG12754-PA
    Or42b-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      5797195..5798512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078900.2NP_523624.2  odorant receptor 42b [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523624.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9V9I4
      UniProtKB/TrEMBL
      E2E4L5, E2E4L6, E2E4M2, E2E4M3, E2E4M5, E2E4N7, E2E4P8
      Related
      FBpp0085387, FBtr0086051
      Conserved Domains (1) summary
      pfam02949
      Location:76381
      7tm_6; 7tm Odorant receptor