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    CG13148 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36398, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG13148provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033767
    Locus tag
    Dmel_CG13148
    See related
    AllianceGenome:FB:FBgn0033767
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13148
    Orthologs
    all
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    Genomic context

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    See CG13148 in Genome Data Viewer
    Location:
    49B12-49B12; 2-67 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12686249..12688786)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8573754..8576291)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Glutaminase Neighboring gene Nucleoporin 188kDa Neighboring gene uncharacterized protein Neighboring gene Odorant-binding protein 49a Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Regulation of the X Chromosome in the Germline and Soma of Drosophila melanogaster Males. Argyridou E, et al. Genes (Basel), 2018 May 4. PMID 29734690, Free PMC Article
    2. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article
    3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    4. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13148-PA
    CG13148-PB
    CG13148-PC
    CG13148-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      12686249..12688786
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273994.1 → NP_001260923.1  uncharacterized protein Dmel_CG13148, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260923.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E9A0, Q8T911
      Conserved Domains (1) summary
      pfam13837
      Location:60 → 143
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    2. NM_136967.2 → NP_610811.1  uncharacterized protein Dmel_CG13148, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610811.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E9A0, Q8T911
      Related
      FBpp0086961
      Conserved Domains (1) summary
      pfam13837
      Location:60 → 143
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    3. NM_165944.2 → NP_725220.1  uncharacterized protein Dmel_CG13148, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725220.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E9A0, Q8T911
      Related
      FBpp0086960
      Conserved Domains (1) summary
      pfam13837
      Location:60 → 143
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    4. NM_001273995.1 → NP_001260924.1  uncharacterized protein Dmel_CG13148, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260924.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E9A0, Q8T911
      Conserved Domains (1) summary
      pfam13837
      Location:60 → 143
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0E9A0 Q0E9A0
    Q8T911 Q8T911

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