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    ms(3)76Cc male sterile (3) 76Cc [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40142, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ms(3)76Ccprovided by FlyBase
    Official Full Name
    male sterile (3) 76Ccprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036895
    Locus tag
    Dmel_CG9392
    See related
    AllianceGenome:FB:FBgn0036895
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9392; Dmel\CG9392
    Summary
    Involved in spermatid differentiation. Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See ms(3)76Cc in Genome Data Viewer
    Location:
    76B9-76B9; 3-45 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (19620502..19624309)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (19613602..19617409)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene lethal (3) 76BDm Neighboring gene Phosphatidylinositol glycan anchor biosynthesis class F Neighboring gene anti-silencing factor 1 Neighboring gene wallenda Neighboring gene Ring finger protein 146

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A widely distributed family of eukaryotic and bacterial deubiquitinases related to herpesviral large tegument proteins. Erven I, et al. Nat Commun, 2022 Dec 10. PMID 36496440, Free PMC Article
    2. Anent the genomics of spermatogenesis in Drosophila melanogaster. Lindsley DL, et al. PLoS One, 2013. PMID 23409089, Free PMC Article
    3. Molecular genetic analysis of Chd3 and polytene chromosome region 76B-D in Drosophila melanogaster. Cooper MT, et al. Genetics, 2010 Jul. PMID 20439780, Free PMC Article
    4. In vivo analysis of proteomes and interactomes using Parallel Affinity Capture (iPAC) coupled to mass spectrometry. Rees JS, et al. Mol Cell Proteomics, 2011 Jun. PMID 21447707, Free PMC Article
    5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    NOT enables deubiquitinase activity IKR
    Inferred from Key Residues
    more info
    		 PubMed 
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in spermatid differentiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    male sterile (3) 76Cc
    Names
    CG9392-PA
    ms(3)76Cc-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      19620502..19624309
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140879.2 → NP_649136.1  male sterile (3) 76Cc [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649136.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VW23
      Related
      FBpp0074716
      Conserved Domains (1) summary
      pfam05110
      Location:631 → 1049
      AF-4; AF-4 proto-oncoprotein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VW23 Q9VW23

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