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    fd102C forkhead domain 102C [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43843, updated on 9-Dec-2024

    Summary

    Official Symbol
    fd102Cprovided by FlyBase
    Official Full Name
    forkhead domain 102Cprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039937
    Locus tag
    Dmel_CG11152
    See related
    AllianceGenome:FB:FBgn0039937
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11152; Dm-FoxQ2; Dmcg11152; Dmel\CG11152; FoxQ2
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anatomical structure morphogenesis; cell differentiation; and regulation of transcription by RNA polymerase II. Is expressed in several structures, including anlage in statu nascendi; antennal anlage; antennal primordium; central brain anlage; and head epidermis primordium. Orthologous to human FOXJ2 (forkhead box J2) and FOXJ3 (forkhead box J3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See fd102C in Genome Data Viewer
    Location:
    102E3-102E3; 4-0 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 4 NC_004353.4 (836986..844529, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 4 NC_004353.3 (857612..865155, complement)

    Chromosome 4 - NC_004353.4Genomic Context describing neighboring genes Neighboring gene Mediator complex subunit 26 Neighboring gene Sox102F Neighboring gene long non-coding RNA:CR45123 Neighboring gene pseudo Neighboring gene Gigyf

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    mobile_element

    • Loc: c839551-839461 mobile_element_type = transposon:INE-1{}2692
    • Loc: c839915-839626 mobile_element_type = transposon:INE-1{}2693
    • Loc: c842695-841742 mobile_element_type = transposon:HB{}2849

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    forkhead domain 102C
    Names
    CG11152-PA
    fd102C-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004353.4 Reference assembly

      Range
      836986..844529 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143694.3NP_651951.1  forkhead domain 102C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651951.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V481
      Related
      FBpp0088311
      Conserved Domains (1) summary
      pfam00250
      Location:129213
      Forkhead; Forkhead domain