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    CG4294 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37579, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG4294provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034742
    Locus tag
    Dmel_CG4294
    See related
    AllianceGenome:FB:FBgn0034742
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG4294
    Summary
    Is expressed in organism; pole plasm; posterior endoderm; and primordial germ cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG4294 in Genome Data Viewer
    Location:
    58F1-58F1; 2-100 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22600405..22605667, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18487910..18493172, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45328 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ribosomal protein S16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The mapping of Drosophila melanogaster mutant A.4.4. Bieser K, et al. MicroPubl Biol, 2018 Dec 17. PMID 32550366, Free PMC Article
    2. Genome-wide RNAi screen identifies broadly-acting host factors that inhibit arbovirus infection. Yasunaga A, et al. PLoS Pathog, 2014 Feb. PMID 24550726, Free PMC Article
    3. The computational analysis of scientific literature to define and recognize gene expression clusters. Raychaudhuri S, et al. Nucleic Acids Res, 2003 Aug 1. PMID 12888516, Free PMC Article
    4. Seizure suppression through manipulating splicing of a voltage-gated sodium channel. Lin WH, et al. Brain, 2015 Apr. PMID 25681415, Free PMC Article
    5. The nucleosome remodeling factor ISWI functionally interacts with an evolutionarily conserved network of cellular factors. Arancio W, et al. Genetics, 2010 May. PMID 20194965, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG4294-PB
    CG4294-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      22600405..22605667 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137840.4 → NP_611684.3  uncharacterized protein Dmel_CG4294, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611684.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8WHH6, Q9W238
      Conserved Domains (1) summary
      pfam07382
      Location:871 → 1024
      HC2; Histone H1-like nucleoprotein HC2

    2. NM_001259533.2 → NP_001246462.1  uncharacterized protein Dmel_CG4294, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246462.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K8A7
      Conserved Domains (1) summary
      pfam07382
      Location:871 → 1024
      HC2; Histone H1-like nucleoprotein HC2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4K8A7 A0A0B4K8A7
    Q9W238 Q9W238

    Gene LinkOut

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