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    Cth Cystathionine gamma-lyase [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37143, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cthprovided by FlyBase
    Official Full Name
    Cystathionine gamma-lyaseprovided by FlyBase
    Primary source
    FLYBASE:FBgn0000566
    Locus tag
    Dmel_CG5345
    See related
    AllianceGenome:FB:FBgn0000566
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5345; cse; CSE; Dmel\CG5345; Eip40; EIP40; Eip55BD; Eip55E; LD22255
    Summary
    Predicted to enable cystathionine gamma-lyase activity and pyridoxal phosphate binding activity. Involved in glutathione biosynthetic process. Predicted to be active in cytoplasm. Is expressed in several structures, including embryonic/larval midgut primordium; gut section; larval muscle cell; mesoderm; and visceral mesoderm derivative. Human ortholog(s) of this gene implicated in amino acid metabolic disorder and cystathioninuria. Orthologous to human CTH (cystathionine gamma-lyase). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Cth in Genome Data Viewer
    Location:
    55E2-55E2; 2-86 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18627918..18629395)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14515423..14516900)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Autophagy-related 7 Neighboring gene uncharacterized protein Neighboring gene Secretory 6 Neighboring gene zonda Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables cystathionine gamma-lyase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cystathionine gamma-lyase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables cystathionine gamma-lyase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables pyridoxal phosphate binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cysteine biosynthetic process via cystathionine IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in glutathione biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sulfur amino acid metabolic process NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in transsulfuration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in transsulfuration IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    cystathionine gamma-lyase
    Names
    CG5345-PA
    CG5345-PB
    Cth-PA
    Cth-PB
    Ecdysone-induced polypeptide 40kD
    Ecdysone-induced protein 40kD
    Ecdysone-induced protein 55E
    Eip55E
    cystathionine-gamma-lyase
    ecdysone induced protein 55E
    NP_001286578.1
    NP_611352.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18627918..18629395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299649.1NP_001286578.1  cystathionine gamma-lyase, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286578.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O97121, Q7JXZ2
      Conserved Domains (2) summary
      PRK08776
      Location:7393
      PRK08776; cystathionine gamma-synthase; Provisional
      pfam01053
      Location:11388
      Cys_Met_Meta_PP; Cys/Met metabolizm PLP-dependent enzyme
    2. NM_137508.4NP_611352.1  cystathionine gamma-lyase, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611352.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O97121, Q7JXZ2
      Related
      FBpp0085889
      Conserved Domains (2) summary
      PRK08776
      Location:7393
      PRK08776; cystathionine gamma-synthase; Provisional
      pfam01053
      Location:11388
      Cys_Met_Meta_PP; Cys/Met metabolizm PLP-dependent enzyme